Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18828 | Soybean | nucleus | 90.91 | 21.78 |
| PGSC0003DMT400071449 | Potato | nucleus | 50.76 | 18.56 |
| Solyc11g013480.1.1 | Tomato | nucleus | 46.97 | 18.13 |
| KRH10952 | Soybean | nucleus | 37.12 | 16.84 |
| CDX79239 | Canola | nucleus | 59.09 | 14.34 |
| CDX68039 | Canola | nucleus | 58.33 | 14.13 |
| Bra003665.1-P | Field mustard | nucleus | 58.33 | 14.1 |
| CDX88392 | Canola | nucleus | 54.55 | 13.58 |
| Bra015651.1-P | Field mustard | nucleus | 53.79 | 13.0 |
| KRH64757 | Soybean | plastid | 55.3 | 12.99 |
| AT1G77850.2 | Thale cress | nucleus | 58.33 | 12.92 |
| GSMUA_Achr6P18900_001 | Banana | plastid | 36.36 | 11.68 |
| KRH19870 | Soybean | nucleus | 45.45 | 11.67 |
| Zm00001d030803_P001 | Maize | nucleus | 28.79 | 11.18 |
| Zm00001d026694_P001 | Maize | nucleus | 29.55 | 10.66 |
| GSMUA_Achr9P29480_001 | Banana | nucleus | 35.61 | 10.49 |
| KRG91907 | Soybean | nucleus | 45.45 | 10.12 |
| KRH34867 | Soybean | nucleus | 46.21 | 9.97 |
| Zm00001d026687_P001 | Maize | nucleus | 34.09 | 9.74 |
| Os07t0183100-00 | Rice | nucleus | 25.76 | 9.5 |
| EES13156 | Sorghum | nucleus | 37.12 | 9.46 |
| Zm00001d002929_P001 | Maize | nucleus | 36.36 | 9.36 |
| HORVU7Hr1G108360.1 | Barley | nucleus | 23.48 | 9.17 |
| TraesCS2D01G577800.1 | Wheat | nucleus | 35.61 | 9.16 |
| TraesCS2A01G567300.1 | Wheat | nucleus | 35.61 | 9.13 |
| Zm00001d030801_P001 | Maize | nucleus | 30.3 | 8.97 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 8.8 |
| KRH22880 | Soybean | nucleus | 43.94 | 8.66 |
| KRH29907 | Soybean | nucleus | 45.45 | 8.61 |
| KRH32480 | Soybean | nucleus | 45.45 | 8.57 |
| KRH25023 | Soybean | nucleus | 44.7 | 8.42 |
| Os04t0690600-01 | Rice | plastid | 33.33 | 8.32 |
| KRH26435 | Soybean | nucleus | 43.18 | 8.14 |
| KRG95987 | Soybean | nucleus | 42.42 | 8.0 |
| TraesCS7D01G463000.1 | Wheat | nucleus | 21.21 | 7.91 |
| TraesCS7A01G475700.1 | Wheat | nucleus | 21.21 | 7.55 |
| TraesCS7A01G475600.1 | Wheat | nucleus | 21.21 | 7.49 |
| KRH20373 | Soybean | nucleus | 36.36 | 6.72 |
| Os07t0183700-00 | Rice | mitochondrion | 26.52 | 6.68 |
| KRH50128 | Soybean | nucleus | 35.61 | 6.63 |
| KRH21341 | Soybean | nucleus | 36.36 | 6.52 |
| KRH25669 | Soybean | cytosol | 3.79 | 4.46 |
| Os07t0183350-00 | Rice | extracellular | 18.94 | 3.28 |
| Os07t0183200-01 | Rice | nucleus | 3.79 | 1.23 |
| HORVU2Hr1G125740.1 | Barley | nucleus | 0.0 | 0.0 |
| KRH10951 | Soybean | cytosol, nucleus | 0.0 | 0.0 |
| VIT_18s0001g04180.t01 | Wine grape | mitochondrion, nucleus | 0.0 | 0.0 |
| KRH19868 | Soybean | nucleus | 0.0 | 0.0 |
| KRH16623 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02008964 | EnsemblPlants:KRH16622 | EnsemblPlantsGene:GLYMA_14G1665002 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF38 | ProteinID:KRH16622 |
| ProteinID:KRH16622.1 | UniParc:UPI0006EDF17C | UniProt:A0A0R0GDW2 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr14:+:41161768..41162164
Molecular Weight (calculated)
14792.4 Da
IEP (calculated)
7.055
GRAVY (calculated)
-0.463
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPQPRRVD PKIWRACAGA AVQIPKLHSR VYYFPQGHLE HASPSHYLNP LLRSLPFVPC HVSSLDFLAD PFSDEVFAKF LLTPLSQQPF PNDTTEARNE
101: EEKDRENGVV SFSKILTPSD ANNGGGFSVP RY
101: EEKDRENGVV SFSKILTPSD ANNGGGFSVP RY
001: MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQFTPTNY
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQGIFRSL SSTIIN
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQGIFRSL SSTIIN
Arabidopsis Description
ARF17auxin response factor 17 [Source:TAIR;Acc:AT1G77850]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.