Factsheet for Os07t0183100-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16622	Soybean	mitochondrion	9.5	25.76
Os04t0519700-01	Rice	nucleus	11.73	10.71
Os04t0690600-01	Rice	plastid	15.64	10.59
Os07t0183700-00	Rice	mitochondrion	15.08	10.31
HORVU7Hr1G108360.1	Barley	nucleus	9.5	10.06
Solyc11g013480.1.1	Tomato	nucleus	8.38	8.77
PGSC0003DMT400071449	Potato	nucleus	8.66	8.59
TraesCS7D01G463000.1	Wheat	nucleus	8.38	8.47
TraesCS7A01G475700.1	Wheat	nucleus	8.66	8.36
TraesCS7A01G475600.1	Wheat	nucleus	8.66	8.29
GSMUA_Achr6P18900_001	Banana	plastid	7.82	6.81
KRH18828	Soybean	nucleus	10.34	6.72
CDX79239	Canola	nucleus	9.22	6.07
GSMUA_Achr10P...	Banana	nucleus	8.38	6.0
CDX68039	Canola	nucleus	8.94	5.87
Bra003665.1-P	Field mustard	nucleus	8.94	5.86
Os10t0479900-01	Rice	nucleus	11.17	5.73
Os02t0628600-01	Rice	nucleus	10.89	5.73
GSMUA_Achr9P29480_001	Banana	nucleus	6.98	5.58
AT1G77850.2	Thale cress	nucleus	9.22	5.54
CDX88392	Canola	nucleus	8.1	5.47
Os05t0563400-01	Rice	nucleus	10.61	5.34
Bra015651.1-P	Field mustard	nucleus	7.82	5.13
Os01t0670800-02	Rice	nucleus	9.78	4.87
Os06t0685700-01	Rice	nucleus	9.5	4.86
KRH64757	Soybean	plastid	7.54	4.8
Os07t0183350-00	Rice	extracellular	9.5	4.46
Os01t0753500-01	Rice	plastid	8.94	4.38
Os05t0515400-01	Rice	nucleus	3.07	1.77
Os07t0183200-01	Rice	nucleus	1.68	1.47
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	0.28	0.29
KRH16623	Soybean	nucleus	0.28	0.26
ATMG00940.1	Thale cress	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	UniProt:A0A0P0X2W6	InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAT00340.1
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	EnsemblPlantsGene:Os07g0183100
EnsemblPlants:Os07t0183100-00	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF19
SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000393B8CC	SEG:seg	:	:

Description

AUXIN RESPONSE FACTOR 20Transcriptional factor B3 domain containing protein. (Os07t0183100-00)

Coordinates

chr7:-:4402060..4403139

Molecular Weight (calculated)

39681.4 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.172

Length

358 amino acids

Sequence
(BLAST)

001: MAQPPDAAAA AAVPPPVVID RDVWHACAVP YSGVLPGVGT LVYYIPHGHI EQCAEDPALL LSRLPDPIHP VPCTVADLVL DVDAESGEAY ATISLLPGSH
101: DDTTARRQVP AHGEPGFRFF EKQLSPADVT SNALVLPAGA EHVLPPLDIA AYQTARLFDV RDLRGKRFEF VHIWDKKRCR YMLGDLGVND NDGWRGFVKA
201: KRLATRDTVV FMRRGGGDGD GDGELLVGVR RAPRARGGHH PRPGVEDNKV VSEVWLAMQG VTPFEVTYYP REGTFEFVVS RDEYIGFSFS PFYPFVPGTT
301: VHLRMNPLQI AQSISGTVRT FDHLRPWRML EVLISSSHHP LPTQSDLFID QFDRCMLR

Best Arabidopsis Sequence Match ( AT5G62000.4 )
(BLAST)

001: MASSEVSMKG NRGGDNFSSS GFSDPKETRN VSVAGEGQKS NSTRSAAAER ALDPEAALYR ELWHACAGPL VTVPRQDDRV FYFPQGHIEQ VEASTNQAAE
101: QQMPLYDLPS KLLCRVINVD LKAEADTDEV YAQITLLPEA NQDENAIEKE APLPPPPRFQ VHSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP
201: TQELVAKDLH ANEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAISTGTMF
301: TVYYKPRTSP SEFIVPFDQY MESVKNNYSI GMRFKMRFEG EEAPEQRFTG TIVGIEESDP TRWPKSKWRS LKVRWDETSS IPRPDRVSPW KVEPALAPPA
401: LSPVPMPRPK RPRSNIAPSS PDSSMLTREG TTKANMDPLP ASGLSRVLQG QEYSTLRTKH TESVECDAPE NSVVWQSSAD DDKVDVVSGS RRYGSENWMS
501: SARHEPTYTD LLSGFGTNID PSHGQRIPFY DHSSSPSMPA KRILSDSEGK FDYLANQWQM IHSGLSLKLH ESPKVPAATD ASLQGRCNVK YSEYPVLNGL
601: STENAGGNWP IRPRALNYYE EVVNAQAQAQ AREQVTKQPF TIQEETAKSR EGNCRLFGIP LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK
701: GSKSTNDHRE QGRPFQTNNP HPKDAQTKTN SSRSCTKVHK QGIALGRSVD LSKFQNYEEL VAELDRLFEF NGELMAPKKD WLIVYTDEEN DMMLVGDDPW
801: QEFCCMVRKI FIYTKEEVRK MNPGTLSCRS EEEAVDGGRL VETGEQNGMM GLR

Arabidopsis Description

ARF2Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.