Factsheet for Os01t0753500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0670800-02
Os01t0753500-01
Os05t0515400-01
Os05t0563400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G33860.1	Os01t0670800-02	AT2G33860.1	24485461
AT2G33860.1	Os01t0753500-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0515400-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0563400-01	AT2G33860.1	24485461

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G292400.1	Wheat	nucleus	66.76	74.73
TraesCS3B01G327000.1	Wheat	nucleus	66.48	73.64
TraesCS3D01G292100.1	Wheat	plastid	69.36	73.16
HORVU3Hr1G072340.2	Barley	nucleus	67.44	72.71
KXG33384	Sorghum	nucleus	65.12	69.49
Zm00001d043431_P012	Maize	nucleus	63.75	67.34
Zm00001d012731_P010	Maize	nucleus	63.47	67.25
Os05t0515400-01	Rice	nucleus	48.02	56.43
AT2G33860.1	Thale cress	nucleus	36.66	44.08
CDY17209	Canola	nucleus	36.25	44.02
Bra021885.1-P	Field mustard	nucleus	33.11	43.84
CDY37679	Canola	nucleus	35.57	43.77
Bra005465.1-P	Field mustard	nucleus	36.11	43.64
CDY27929	Canola	nucleus	35.98	43.26
Os01t0670800-02	Rice	nucleus	42.41	43.18
Os05t0563400-01	Rice	nucleus	41.04	42.13
GSMUA_Achr4P10590_001	Banana	nucleus	40.9	41.88
GSMUA_Achr4P02750_001	Banana	nucleus	40.49	41.23
Solyc02g077560.2.1	Tomato	nucleus	40.08	39.22
KRH50128	Soybean	nucleus	37.89	39.07
KRH20373	Soybean	nucleus	38.03	38.94
PGSC0003DMT400081282	Potato	nucleus	39.81	38.9
KRH21341	Soybean	nucleus	38.71	38.45
VIT_10s0003g00420.t01	Wine grape	nucleus	40.77	38.25
GSMUA_Achr7P25330_001	Banana	nucleus	37.35	37.55
GSMUA_Achr3P31350_001	Banana	nucleus	40.63	37.45
Os04t0519700-01	Rice	nucleus	18.06	33.67
Os02t0628600-01	Rice	nucleus	24.76	26.58
Os10t0479900-01	Rice	nucleus	24.9	26.07
Os06t0685700-01	Rice	nucleus	23.12	24.14
Os04t0690600-01	Rice	plastid	16.96	23.44
Os07t0183700-00	Rice	mitochondrion	10.26	14.31
Os07t0183350-00	Rice	extracellular	10.81	10.37
Os07t0183100-00	Rice	nucleus	4.38	8.94
Os07t0183200-01	Rice	nucleus	0.14	0.25

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	EntrezGene:4327014	EMBL:AK072330	InterPro:Auxin_resp
InterPro:B3_DNA-bd	ProteinID:BAD87193.1	ProteinID:BAD87282.1	ProteinID:BAF06188.1	ProteinID:BAS74386.1	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725
GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	EnsemblPlantsGene:Os01g0753500	EnsemblPlants:Os01t0753500-01
PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF13	UniProt:Q5JMM1
SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI00004C28DF	RefSeq:XP_015634503.1	SEG:seg	:

Description

AUXIN RESPONSE FACTOR 3Transcriptional factor B3 family protein. (Os01t0753500-01)

Coordinates

chr1:-:31617190..31623205

Molecular Weight (calculated)

79587.9 Da

IEP (calculated)

7.942

GRAVY (calculated)

-0.446

Length

731 amino acids

Sequence
(BLAST)

001: MASSASSSSS PSSRPPLMAL PSFYRPPWPS ERGGEQRATD CWAGSPAAGG GRARATAMGI DLNNTASGGE EDAPAPGPVC RDLWHACAGP VVSLPRRGSA
101: VVYLPQGHLS AAGAGGGIRG EVAVALPPHV ACRVVDVELC ADAATDEVYA RLALRAEGEV FERNLHGGGI EREDDMEDGD EERKSRMLHM FCKTLTASDT
201: STHGGFSVPR RAAEDCFPPL DHKQLRPSQE LVAKDLHGAK WRFRHIYRGQ PRRHLLTTGW SSFVNKKKLV SGDAVLFLRG DDGELRLGVR RATQLKNEAI
301: FKAFSSESSK MRTLSAVADS LKHGSVFHIC YNPRATASEY VVPYWKFVKS FNHPVCIGMR FKFHFESEDV NERRSGMIAG VSEVDPIRWP GSKWRSLLVR
401: WEDATDCNSQ NRVSPWEIEI VGGSISVAHS LSASSSKRTK LCPQGNLDVP ALYGNGRPDS VETEKFPRVL QGQELMGSRT HRATCSPQSI DITKSKSFDA
501: WRFLTDTRSC MLGSSTSRLP VQYSGYTHQS VSFGESIGFP EVLQGQEISQ TVPPFQGMLP DACSAKSRYE LKNYVCTPAT MNGLSSANEG YCLSLSTVPP
601: SPPSSLMLYQ TGVPQLELAS KNNDKSGNDS QPALRQHKLL SETSWDQFKI GKASTPGNAT KPGNGGREVD RTSCRLFGFS LTEKIIPTDK DGEKEVSYET
701: DCQNPRMLDL FGYNCSTPGA LHALCAAPLG I

Best Arabidopsis Sequence Match ( AT2G33860.1 )
(BLAST)

001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL

Arabidopsis Description

ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.