Factsheet for Os01t0670800-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0670800-02
Os01t0753500-01
Os05t0515400-01
Os05t0563400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G33860.1	Os01t0670800-02	AT2G33860.1	24485461
AT2G33860.1	Os01t0753500-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0515400-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0563400-01	AT2G33860.1	24485461

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G246000.1	Wheat	nucleus	69.78	75.23
TraesCS3B01G273400.2	Wheat	nucleus	73.82	75.07
EES03412	Sorghum	nucleus	71.45	73.08
TraesCS3D01G245400.2	Wheat	nucleus	74.65	71.75
Zm00001d043922_P001	Maize	nucleus	70.75	71.75
Os05t0563400-01	Rice	nucleus	69.08	69.66
CDY37679	Canola	nucleus	41.23	49.83
Bra021885.1-P	Field mustard	nucleus	37.88	49.28
Bra005465.1-P	Field mustard	nucleus	41.23	48.93
AT2G33860.1	Thale cress	nucleus	41.36	48.85
CDY17209	Canola	nucleus	40.81	48.67
CDY27929	Canola	nucleus	40.95	48.36
KRH20373	Soybean	nucleus	45.26	45.52
KRH50128	Soybean	nucleus	44.85	45.42
GSMUA_Achr4P02750_001	Banana	nucleus	45.13	45.13
GSMUA_Achr4P10590_001	Banana	nucleus	44.85	45.1
VIT_10s0003g00420.t01	Wine grape	nucleus	48.33	44.54
KRH21341	Soybean	nucleus	44.71	43.61
GSMUA_Achr7P25330_001	Banana	nucleus	44.01	43.47
Solyc02g077560.2.1	Tomato	nucleus	44.71	42.97
Os05t0515400-01	Rice	nucleus	37.05	42.77
PGSC0003DMT400081282	Potato	nucleus	44.29	42.51
Os01t0753500-01	Rice	plastid	43.18	42.41
GSMUA_Achr3P31350_001	Banana	nucleus	46.52	42.12
Os04t0519700-01	Rice	nucleus	18.66	34.18
Os02t0628600-01	Rice	nucleus	25.21	26.58
Os10t0479900-01	Rice	nucleus	25.77	26.5
Os06t0685700-01	Rice	nucleus	25.49	26.14
Os04t0690600-01	Rice	plastid	16.57	22.5
Os07t0183700-00	Rice	mitochondrion	11.56	15.84
Os07t0183350-00	Rice	extracellular	11.42	10.76
Os07t0183100-00	Rice	nucleus	4.87	9.78
Os07t0183200-01	Rice	nucleus	0.28	0.49

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	EntrezGene:4325895	EMBL:AB071291	EMBL:AP014957
InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAF05739.1	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987
InterPro:IPR003340	InterPro:IPR015300	EnsemblPlantsGene:Os01g0670800	EnsemblPlants:Os01t0670800-02	PFAM:PF02362	PFAM:PF06507
PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF31	UniProt:Q0JKI9	SMART:SM01019	SUPFAM:SSF101936
UniParc:UPI00000A2EF4	RefSeq:XP_015647511.1	SEG:seg	:	:	:

Description

auxin response factor-2, auxin response factor 2, OsETTIN2Similar to Auxin response factor 2. (Os01t0670800-01);Ortholog of Arabidopsis ETTIN, Awn development (Os01t0670800-02)

Coordinates

chr1:-:27501506..27507181

Molecular Weight (calculated)

78688.8 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.446

Length

718 amino acids

Sequence
(BLAST)

001: MVGIDLNTVE EEEDEEEGGA TGTVTAPAEA RAGGAVCLEL WHACAGPVAP LPRKGSAVVY LPQGHLEHLG AAPGSGPGAA VPPHVFCRVV DVSLHADAAT
101: DEVYAQVSLV ADNEEVERRM REGEDGAACD GEGEDAVKRP ARIPHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYSL QRPFQELVAK DLHGTEWRFR
201: HIYRGQPRRH LLTTGWSGFI NKKKLVSGDA VLFLRGEDGE LRLGVRRAAQ LKNASPFPAL HNQISNTSSL SEVAHAVAVK SIFHIYYNPR LSQSEFIIPY
301: WKFMRSFSQP FSVGMRFKLR YESEDASERR RTGIIIGSRE ADPMWHGSKW KCLVVKWDDD VECRRPNGVS PWEIELSGSV SGSHLSTPHS KRLKSCFPQV
401: NPDIVLPNGS VSSDFAESAR FHKVLQGQEL LGLKTRDGTV NTASQATEAR NFQYTDERSC SINMSNNILG VPRLGVKTPS GNPGFSYHCS GFGESQRFQE
501: VLQGQEVFRP YRGGTLSDAC IRGSGFRQPD GNHAPGAAFK WLAPQGCDHH GITTSVLPQA SSPSSVLMFP QTSSKMPGLE YIYGCLDRNE NSRHFKIGPT
601: QDMTRTDQTL RLWPHLISGK VLDECTRNEK LHSPVSGAEH ESNNKCLNTN GCKIFGISLT EKAQAGDEVD CGNASYHSRL QSLKPQMPKS LGSSCATVHE
701: QRPVVGRVVD ISAVNTMI

Best Arabidopsis Sequence Match ( AT2G33860.1 )
(BLAST)

001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL

Arabidopsis Description

ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.