Factsheet for Os05t0563400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0670800-02
Os01t0753500-01
Os05t0515400-01
Os05t0563400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G33860.1	Os01t0670800-02	AT2G33860.1	24485461
AT2G33860.1	Os01t0753500-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0515400-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0563400-01	AT2G33860.1	24485461

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053166_P001	Maize	nucleus	19.24	92.57
EES18676	Sorghum	nucleus	77.11	74.29
TraesCS1D01G404400.1	Wheat	nucleus	75.56	73.2
TraesCS1A01G396400.1	Wheat	nucleus	74.72	72.38
TraesCS1B01G424700.1	Wheat	nucleus	75.42	72.37
Zm00001d039006_P007	Maize	nucleus	74.86	69.4
Os01t0670800-02	Rice	nucleus	69.66	69.08
HORVU1Hr1G087460.6	Barley	mitochondrion, nucleus	73.74	61.4
CDY37679	Canola	nucleus	40.87	48.99
Bra021885.1-P	Field mustard	nucleus	37.5	48.37
Zm00001d006004_P001	Maize	nucleus	22.89	48.37
CDY17209	Canola	nucleus	40.87	48.34
Bra005465.1-P	Field mustard	nucleus	41.01	48.26
CDY27929	Canola	nucleus	41.15	48.19
AT2G33860.1	Thale cress	nucleus	40.87	47.86
KRH50128	Soybean	nucleus	45.22	45.42
GSMUA_Achr4P10590_001	Banana	nucleus	45.51	45.38
KRH20373	Soybean	nucleus	45.08	44.96
VIT_10s0003g00420.t01	Wine grape	nucleus	49.02	44.8
KRH21341	Soybean	nucleus	45.93	44.43
GSMUA_Achr4P02750_001	Banana	nucleus	44.8	44.43
GSMUA_Achr7P25330_001	Banana	nucleus	43.82	42.92
PGSC0003DMT400081282	Potato	nucleus	44.66	42.51
Os05t0515400-01	Rice	nucleus	36.66	41.96
Solyc02g077560.2.1	Tomato	nucleus	43.82	41.77
GSMUA_Achr3P31350_001	Banana	nucleus	46.49	41.74
Os01t0753500-01	Rice	plastid	42.13	41.04
Os04t0519700-01	Rice	nucleus	19.24	34.95
Os02t0628600-01	Rice	nucleus	26.26	27.46
Os10t0479900-01	Rice	nucleus	25.98	26.5
Os06t0685700-01	Rice	nucleus	25.56	26.0
Os04t0690600-01	Rice	plastid	17.56	23.63
Os07t0183700-00	Rice	mitochondrion	11.38	15.46
Os07t0183350-00	Rice	extracellular	11.94	11.15
Os07t0183100-00	Rice	nucleus	5.34	10.61
Os07t0183200-01	Rice	nucleus	0.28	0.49

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	EntrezGene:9268260	ProteinID:AAT77393.1	EMBL:AB071290
EMBL:AK062170	InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAH93251.1	ProteinID:BAS95343.1	ProteinID:BAS95344.1
InterPro:DNA-bd_pseudobarrel_sf	ProteinID:EEE64694.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlantsGene:Os05g0563400	EnsemblPlants:Os05t0563400-01	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384
PANTHER:PTHR31384:SF31	UniProt:Q8S985	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI00000A35F7	RefSeq:XP_015640263.1
SEG:seg	:	:	:	:	:

Description

auxin response factor-15, auxin response factor 15, OsETTIN1Similar to Auxin response factor 5. (Os05t0563400-01);Similar to Auxin response factor 15. (Os05t0563400-02)

Coordinates

chr5:+:28034380..28039732

Molecular Weight (calculated)

78084.0 Da

IEP (calculated)

7.091

GRAVY (calculated)

-0.502

Length

712 amino acids

Sequence
(BLAST)

001: MTGIDLNTVE EDEEEAAEEV AANGSSPAPA RAGAVCLELW HACAGPVAPL PRKGGVVVYL PQGHLEHLGD APAAAAAAAA VPPHVFCRVV DVTLLADAAT
101: DEVYAQLSLV PEKEEVARRA DDGEGEDGDG MKQRFARMPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYSQQRPSQ ELVAKDLHST EWRFRHIYRG
201: QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR GDDGELRLGV RRAAQLKNGS AFPALYNQCS NLGTLANVAH AVATESVFNI YYNPRLSQSE FIVPYWKFMK
301: SLSQPFSVGL RFKMRYESED ATERRYTGII TGSGDTDPMW HGSKWKCLLV RWDDDAEFRR PNRVSPWEIE LTSSVSGSHL STPHSKRLKP CLPHVNPEYM
401: VPRGGGCPDF AESAQFHKVL QGQELLGFKS HGGTAAATSQ PCEARHLQYI DERSCSSDAS NSILGVPRLG DRAPLGNPGF SYHCSGFGES HRLQKVLQGQ
501: ELFRPYRGTL VDASMGSNGF HQQDSPRAPG VVNKWQAQLH GRAAFHGPPA LALPSQSSSP PSVLMFQQAN SKMPRLEFGH GQLDKHENDR RVRFGPSEGI
601: ERREQRIPLQ PYPTSGEVID GQVTVEKSHS PGRHGKDGPD NKAVGTNSCK IFGISLTEKV PAREELDDGD ANYSLQSLKQ VPKSLGNSCA TVHEQRPVVG
701: RVIDISTMDM MI

Best Arabidopsis Sequence Match ( AT2G33860.1 )
(BLAST)

001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL

Arabidopsis Description

ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.