Factsheet for Os07t0183200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0183350-00	Rice	extracellular	77.64	41.47
Os07t0183700-00	Rice	mitochondrion	10.32	8.02
KRH16622	Soybean	mitochondrion	1.23	3.79
Os04t0690600-01	Rice	plastid	3.69	2.84
GSMUA_Achr6P18900_001	Banana	plastid	1.72	1.7
Os07t0183100-00	Rice	nucleus	1.47	1.68
Os02t0628600-01	Rice	nucleus	2.46	1.47
KRH64757	Soybean	plastid	1.97	1.42
TraesCS7A01G475700.1	Wheat	nucleus	1.23	1.35
TraesCS7A01G475600.1	Wheat	nucleus	1.23	1.34
Os10t0479900-01	Rice	nucleus	2.21	1.29
Os04t0519700-01	Rice	nucleus	1.23	1.28
HORVU7Hr1G108360.1	Barley	nucleus	0.98	1.18
AT1G77850.2	Thale cress	nucleus	1.72	1.17
Os06t0685700-01	Rice	nucleus	1.97	1.14
TraesCS7D01G463000.1	Wheat	nucleus	0.98	1.13
KRH18828	Soybean	nucleus	1.47	1.09
CDX88392	Canola	nucleus	1.23	0.94
CDX79239	Canola	nucleus	1.23	0.92
CDX68039	Canola	nucleus	1.23	0.92
Bra015651.1-P	Field mustard	nucleus	1.23	0.92
Bra003665.1-P	Field mustard	nucleus	1.23	0.92
GSMUA_Achr9P29480_001	Banana	nucleus	0.98	0.89
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	0.49	0.58
PGSC0003DMT400071449	Potato	nucleus	0.49	0.55
KRH16623	Soybean	nucleus	0.49	0.52
GSMUA_Achr10P...	Banana	nucleus	0.49	0.4
Solyc11g013480.1.1	Tomato	nucleus	0.25	0.29
Os05t0563400-01	Rice	nucleus	0.49	0.28
Os01t0670800-02	Rice	nucleus	0.49	0.28
Os05t0515400-01	Rice	nucleus	0.25	0.16
Os01t0753500-01	Rice	plastid	0.25	0.14
ATMG00940.1	Thale cress	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	EntrezGene:4342576	EMBL:AK064661	InterPro:B3_DNA-bd	ProteinID:BAC24870.1
ProteinID:BAD30343.1	ProteinID:BAF20967.1	ProteinID:BAT00341.1	ncoils:Coil	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	EnsemblPlantsGene:Os07g0183200	EnsemblPlants:Os07t0183200-01
PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF19	UniProt:Q8H507	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI00000AD622	RefSeq:XP_015646443.1	SEG:seg	:	:

Description

Transcriptional factor B3 family protein. (Os07t0183200-01)

Coordinates

chr7:+:4403712..4405484

Molecular Weight (calculated)

44624.1 Da

IEP (calculated)

4.848

GRAVY (calculated)

-0.224

Length

407 amino acids

Sequence
(BLAST)

001: MAAAAAPLAD DGDGIVDRDM WLACAAPNSG RLPAVGSVVF YFVDGHAAQF CQFPAPLLEQ LAVPGPRVFL CTVAAVRLRA DALTNEAYAE ITLDPVADHD
101: VPRLAPAPAP APAAAAGGQQ LRYFVKTLMI SDFDFRIRFS APMADAKGVF PPLVDAKAVQ PLLVKDLHGS PMTFDYGRKG KRVTLAKVWK KFRDDMDFVD
201: GDSVIFMRRR DDDDDDGELY VGVRRQRTLE RPLRNTMRRY RPPTPPQAAV QEAVLAAAGH AAAGERFTVA YRSRKDGDEF VVPREAVEEG LRARLTSLAE
301: VEFVWAVEDG APPIVGPRGK VTAIATGQLW RNLEIVWDGN SEMDMSANFW QVRPVEEVDI SPSTPPPKRL KNCEIDDTAS TSVSVDNGDE QVPTMRQRLE
401: ALIPDNI

Best Arabidopsis Sequence Match ( AT1G19220.1 )
(BLAST)

0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR

Arabidopsis Description

ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.