Factsheet for Os07t0183700-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0183350-00	Rice	extracellular	40.46	27.82
Solyc11g013480.1.1	Tomato	nucleus	17.37	26.61
KRH16622	Soybean	mitochondrion	6.68	26.52
PGSC0003DMT400071449	Potato	nucleus	17.94	26.04
Os04t0519700-01	Rice	nucleus	16.79	22.45
Os04t0690600-01	Rice	plastid	22.33	22.12
ATMG00940.1	Thale cress	cytosol	6.3	20.12
HORVU7Hr1G108360.1	Barley	nucleus	12.79	19.82
TraesCS7A01G475700.1	Wheat	nucleus	13.17	18.6
TraesCS7A01G475600.1	Wheat	nucleus	13.17	18.45
TraesCS7D01G463000.1	Wheat	nucleus	12.21	18.08
GSMUA_Achr9P29480_001	Banana	nucleus	15.27	17.86
CDX88392	Canola	nucleus	16.79	16.6
CDX68039	Canola	nucleus	17.18	16.51
Bra003665.1-P	Field mustard	nucleus	17.18	16.48
CDX79239	Canola	nucleus	16.79	16.18
Bra015651.1-P	Field mustard	nucleus	16.79	16.12
GSMUA_Achr6P18900_001	Banana	plastid	12.6	16.06
KRH64757	Soybean	plastid	16.6	15.48
KRH18828	Soybean	nucleus	16.03	15.24
Os07t0183100-00	Rice	nucleus	10.31	15.08
GSMUA_Achr10P...	Banana	nucleus	13.93	14.6
AT1G77850.2	Thale cress	nucleus	16.6	14.6
Os02t0628600-01	Rice	nucleus	16.98	13.07
Os06t0685700-01	Rice	nucleus	16.79	12.57
Os01t0670800-02	Rice	nucleus	15.84	11.56
Os10t0479900-01	Rice	nucleus	15.27	11.46
Os05t0563400-01	Rice	nucleus	15.46	11.38
KRH16623	Soybean	nucleus	7.82	10.62
Os07t0183200-01	Rice	nucleus	8.02	10.32
Os01t0753500-01	Rice	plastid	14.31	10.26
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	6.3	9.51
Os05t0515400-01	Rice	nucleus	10.11	8.52

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	UniProt:A3BH91	InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAC24876.1
ProteinID:BAD30348.1	ProteinID:BAT00346.1	InterPro:DNA-bd_pseudobarrel_sf	ProteinID:EAZ38930.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987
InterPro:IPR003340	InterPro:IPR015300	EnsemblPlantsGene:Os07g0183700	EnsemblPlants:Os07t0183700-00	PFAM:PF02362	PFAM:PF06507
PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF19	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0000F19FFE
SEG:seg	:	:	:	:	:

Description

B3 domain-containing protein Os07g0183700. (Os07t0183700-00)

Coordinates

chr7:+:4432593..4434430

Molecular Weight (calculated)

56143.3 Da

IEP (calculated)

6.187

GRAVY (calculated)

-0.261

Length

524 amino acids

Sequence
(BLAST)

001: MPLPSCRRRE QRPRQSCFQN PECHLRLRAR QQRPQESAVQ STLSSSIYFS DHFVLTPPPF QITPTSIQNS TWLPIPTSPA VAAPPLPRCL GGVDGEGAPC
101: APPPSPIPAG PASSTVSAAS SAPATRDYLG GITGHRLGQE DDSGGHEYTS VSGIHVPSSS GVAFVSFGQC PQEVISTDLC LGLGPIAATA PLQPPPPPAA
201: AAAAGSPSAT TPEPGHGEAT PTTSSSAQFQ TQAQQVTRDM WMACAAPKSG RLPTVGSLVY YFPDGHAEQC LSRPQEPLPG RIFLCKVTDV RLGAAATNEA
301: LATISLVPIA ADDHAFQLQA PADPDPAPAQ SQSLVSFVKP LTYTDVTKNR FMVPKDDAAA GVLPHIQLND DVPLRIKDLS GKEWAFNYTW KAHTRMFRNG
401: WMEFSNANGL VTGDNAVFMR RGNGEMFMAV RRTRNRPAPF SVEEVIEAVW RAARREPFEV SYCLRQDGDE FVVPRDIVDD GLRARFAPGM AVNFVWAVED
501: GKLPTIGPQG EVISIENYAT SIGA

Best Arabidopsis Sequence Match ( AT4G30080.1 )
(BLAST)

001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV

Arabidopsis Description

ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.