Factsheet for Os07t0183350-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0183200-01	Rice	nucleus	41.47	77.64
Os07t0183700-00	Rice	mitochondrion	27.82	40.46
Os04t0690600-01	Rice	plastid	17.06	24.57
Solyc11g013480.1.1	Tomato	nucleus	9.97	22.22
HORVU7Hr1G108360.1	Barley	nucleus	9.71	21.89
PGSC0003DMT400071449	Potato	nucleus	10.37	21.88
Os04t0519700-01	Rice	nucleus	11.15	21.68
TraesCS7D01G463000.1	Wheat	nucleus	9.97	21.47
GSMUA_Achr9P29480_001	Banana	nucleus	11.68	19.87
KRH64757	Soybean	plastid	14.04	19.04
KRH16622	Soybean	mitochondrion	3.28	18.94
ATMG00940.1	Thale cress	cytosol	4.07	18.9
TraesCS7A01G475700.1	Wheat	nucleus	8.92	18.33
CDX88392	Canola	nucleus	12.73	18.3
TraesCS7A01G475600.1	Wheat	nucleus	8.92	18.18
Bra015651.1-P	Field mustard	nucleus	12.73	17.77
GSMUA_Achr6P18900_001	Banana	plastid	9.58	17.76
CDX68039	Canola	nucleus	12.47	17.43
Bra003665.1-P	Field mustard	nucleus	12.47	17.4
CDX79239	Canola	nucleus	12.2	17.1
KRH18828	Soybean	nucleus	12.34	17.06
KRH16623	Soybean	nucleus	8.4	16.58
GSMUA_Achr10P...	Banana	nucleus	10.76	16.4
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	7.22	15.85
AT1G77850.2	Thale cress	nucleus	11.68	14.93
Os02t0628600-01	Rice	nucleus	13.25	14.83
Os06t0685700-01	Rice	nucleus	13.39	14.57
Os10t0479900-01	Rice	nucleus	12.99	14.18
Os05t0563400-01	Rice	nucleus	11.15	11.94
Os01t0670800-02	Rice	nucleus	10.76	11.42
Os05t0515400-01	Rice	nucleus	8.92	10.93
Os01t0753500-01	Rice	plastid	10.37	10.81
Os07t0183100-00	Rice	nucleus	4.46	9.5

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAC24871.1	ProteinID:BAD30344.1
ProteinID:BAT00342.1	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlantsGene:Os07g0183350	EnsemblPlants:Os07t0183350-00	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384
PANTHER:PTHR31384:SF19	UniProt:Q8H506	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI00000AD623	SEG:seg

Description

B3 domain-containing protein Os07g0183300/Os07g0183600. (Os07t0183350-00)

Coordinates

chr7:+:4406706..4409656

Molecular Weight (calculated)

85040.7 Da

IEP (calculated)

7.034

GRAVY (calculated)

-0.290

Length

762 amino acids

Sequence
(BLAST)

001: MAAAAAALAD DGDGIVDRAM WLACAAPNSG RLPAVGSMVF YFVDGHAEQF CQFPAPLLEQ LAVPGPRVFL CTVAAVRLRA DALTNEAYAD ITLDPVADHD
101: VPRLLPAPAP AAAAGGQQQQ LRYFVKTLMS SDAEYRDRFA VPMDVAKDVF PPLVDAKAVQ PLIVKDLQGS PMTFDYGRNG NRVTLAKVWK KFRDDMDFVD
201: GDSVIFMRRR DDDELYVGVR RQRTLDKPLR TRRSRPPTPL PVAVQEVIAA AGRAAAGEQF TATYRSRQDG DEFVVPREVV EEGLRLRSRF TPEMEVEFVW
301: ALEDGAPPSV GPHGKITAIH DTTWMWRSVE IGWTGGSEMN KYANFWQVRL VGSDDFASAA PPPPLSPKRL KSSEQCPSRP PEPLPGRVFL CKVTAVRLDA
401: TRNELFATMS LIPVARDQAI QPQAPADPGP SSPQVQTTLV SFVKPLTCTD AVKNRYRFIV PKRETAMGVL PQLQLNEHVP LYIKDMHGKE WVINYTWKEY
501: THMLSSGWIK FANANRLVTG DNVVFMRSMD SGERYMGLRR TLKPEPVSVD EVIEAVWRAA RLEPFEVTYL SRQDGDEFVV PCGIVHNALR AKFTPGMVVN
601: FVWAVEEDRL PNVGPQGKVI AIENYATSIW RMIQVEWPSC AGMNRYVNFW QIREVLGESS FEASTCIVRS QDYSPAPQRN LVNALQLPDG TKQLQQNKKS
701: VSSSSTFRLF GKKMTPGVPP RRDTSGLSGQ VSLFSHYLPH DEDDGQVPTM RQRLETLFPD NI

Best Arabidopsis Sequence Match ( AT1G19220.1 )
(BLAST)

0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR

Arabidopsis Description

ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.