Factsheet for Os05t0515400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0670800-02
Os01t0753500-01
Os05t0515400-01
Os05t0563400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G33860.1	Os01t0670800-02	AT2G33860.1	24485461
AT2G33860.1	Os01t0753500-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0515400-01	AT2G33860.1	24485461
AT2G33860.1	Os05t0563400-01	AT2G33860.1	24485461

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22343	Sorghum	nucleus	62.22	57.25
HORVU1Hr1G076690.6	Barley	nucleus	63.5	56.67
Zm00001d038698_P001	Maize	nucleus	61.74	56.47
TraesCS1B01G347900.2	Wheat	nucleus	63.34	56.45
TraesCS1A01G334900.1	Wheat	nucleus	63.67	56.01
TraesCS1D01G337400.1	Wheat	nucleus	62.7	55.87
Os01t0753500-01	Rice	plastid	56.43	48.02
AT2G33860.1	Thale cress	nucleus	36.5	37.34
CDY17209	Canola	nucleus	36.01	37.21
CDY37679	Canola	nucleus	35.53	37.21
Os01t0670800-02	Rice	nucleus	42.77	37.05
Bra005465.1-P	Field mustard	nucleus	36.01	37.02
GSMUA_Achr4P10590_001	Banana	nucleus	42.12	36.69
Os05t0563400-01	Rice	nucleus	41.96	36.66
Bra021885.1-P	Field mustard	nucleus	32.48	36.59
CDY27929	Canola	nucleus	35.37	36.18
GSMUA_Achr4P02750_001	Banana	nucleus	41.64	36.07
KRH50128	Soybean	nucleus	40.51	35.54
KRH20373	Soybean	nucleus	40.51	35.29
GSMUA_Achr7P25330_001	Banana	nucleus	40.51	34.66
GSMUA_Achr3P31350_001	Banana	nucleus	42.6	33.42
VIT_10s0003g00420.t01	Wine grape	nucleus	41.8	33.38
KRH21341	Soybean	nucleus	39.23	33.15
PGSC0003DMT400081282	Potato	nucleus	39.39	32.75
Solyc02g077560.2.1	Tomato	nucleus	38.59	32.13
Os04t0519700-01	Rice	nucleus	16.08	25.51
Os02t0628600-01	Rice	nucleus	24.76	22.61
Os10t0479900-01	Rice	nucleus	24.92	22.21
Os06t0685700-01	Rice	nucleus	24.44	21.71
Os04t0690600-01	Rice	plastid	16.56	19.47
Os07t0183700-00	Rice	mitochondrion	8.52	10.11
Os07t0183350-00	Rice	extracellular	10.93	8.92
Os07t0183100-00	Rice	nucleus	1.77	3.07
Os07t0183200-01	Rice	nucleus	0.16	0.25

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	UniProt:A0A0P0WPL8	InterPro:Auxin_resp	InterPro:B3_DNA-bd
ProteinID:BAS94880.1	ProteinID:BAS94881.1	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340
InterPro:IPR015300	EnsemblPlantsGene:Os05g0515400	EnsemblPlants:Os05t0515400-01	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863
PANTHER:PTHR31384	PANTHER:PTHR31384:SF23	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000393A6AA	SEG:seg

Description

AUXIN RESPONSE FACTOR 14Similar to Auxin response factor 14. (Os05t0515400-01);Similar to Auxin response factor 14. (Os05t0515400-02)

Coordinates

chr5:+:25555850..25561791

Molecular Weight (calculated)

67246.9 Da

IEP (calculated)

7.201

GRAVY (calculated)

-0.452

Length

622 amino acids

Sequence
(BLAST)

001: PEHGGGGSGG GGGGGGADAA TDEVYARLAL VAEGEMLQRN FREGGGEDGA GEMEGCDAEK KPRMPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYK
101: TVRPSQELIA VDLHGTQWKF RHIYRGQPRR HLLTIGWSSF VNRKKLVSGD AVLFLRGDDG QLRLGVRRAV QLRNEALFEP VNSSDSKLRI LSSVASSLEN
201: KSVFHICFNP RSGASEFIVP YWRLLKSLNH PFSIGMRFRV CYESEDANER SAGLISGISE VDPIRWPGSR WKCLLVRWDD STDSSHQNRV SPWEIERVGG
301: SVSVTHSLSS GSKRTKLHFP QGSLDTPFLN GNGHPDSMGT ENFHRVLQGQ EFRGSRSHGV VCSESPGVPN FQSPDNRRFS ADMRGYMMPA SGPPQRNTEF
401: TYQPIGFSES LGFPEVLQGQ EMSQVVPLFR GATFGARTQN DRVVSANSVH RSAAQSGLLA STLGHPISQF TLSSSKVSSP SSVLMFNQAT APNHETVSGT
501: NNKGMHVSQF ASQEMLSETV TWPGTQRQTP SEITSNQFAL ARIPAPPSGA ESGLPKRDAG RSSCRLFGFS LTGNMLGEDG EGLDDGAIEA GCENPPVLEL
601: FGHSHSTPGA LHALCAAAPL GM

Best Arabidopsis Sequence Match ( AT2G33860.1 )
(BLAST)

001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL

Arabidopsis Description

ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.