Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17209 | Canola | nucleus | 86.18 | 87.04 |
| CDY37679 | Canola | nucleus | 85.03 | 87.04 |
| CDY27929 | Canola | nucleus | 87.01 | 87.01 |
| Bra005465.1-P | Field mustard | nucleus | 86.51 | 86.94 |
| Bra021885.1-P | Field mustard | nucleus | 78.45 | 86.41 |
| Zm00001d053166_P001 | Maize | nucleus | 18.59 | 76.35 |
| GSMUA_Achr10P... | Banana | nucleus | 45.39 | 48.0 |
| VIT_10s0003g00420.t01 | Wine grape | nucleus | 59.54 | 46.47 |
| KRH20373 | Soybean | nucleus | 54.28 | 46.22 |
| KRH50128 | Soybean | nucleus | 52.96 | 45.42 |
| KRH21341 | Soybean | nucleus | 54.77 | 45.24 |
| GSMUA_Achr7P11000_001 | Banana | nucleus | 42.6 | 43.31 |
| PGSC0003DMT400081282 | Potato | nucleus | 52.8 | 42.91 |
| Solyc02g077560.2.1 | Tomato | nucleus | 52.14 | 42.44 |
| TraesCS3A01G246000.1 | Wheat | nucleus | 45.39 | 41.44 |
| Os01t0670800-02 | Rice | nucleus | 48.85 | 41.36 |
| EES03412 | Sorghum | nucleus | 47.2 | 40.88 |
| Os05t0563400-01 | Rice | nucleus | 47.86 | 40.87 |
| GSMUA_Achr4P10590_001 | Banana | nucleus | 47.53 | 40.48 |
| TraesCS3A01G292400.1 | Wheat | nucleus | 43.42 | 40.43 |
| GSMUA_Achr4P02750_001 | Banana | nucleus | 47.7 | 40.39 |
| EES18676 | Sorghum | nucleus | 48.68 | 40.05 |
| TraesCS3B01G327000.1 | Wheat | nucleus | 43.42 | 40.0 |
| Zm00001d043922_P001 | Maize | nucleus | 46.55 | 39.97 |
| TraesCS1D01G404400.1 | Wheat | nucleus | 47.7 | 39.46 |
| GSMUA_Achr7P25330_001 | Banana | nucleus | 47.04 | 39.34 |
| TraesCS1B01G424700.1 | Wheat | nucleus | 47.86 | 39.22 |
| TraesCS3D01G292100.1 | Wheat | plastid | 44.41 | 38.96 |
| TraesCS3B01G273400.2 | Wheat | nucleus | 45.23 | 38.95 |
| TraesCS1A01G396400.1 | Wheat | nucleus | 47.04 | 38.91 |
| Zm00001d006004_P001 | Maize | nucleus | 21.55 | 38.87 |
| HORVU3Hr1G072340.2 | Barley | nucleus | 43.09 | 38.64 |
| Zm00001d012731_P010 | Maize | nucleus | 43.59 | 38.41 |
| TraesCS1D01G337400.1 | Wheat | nucleus | 44.08 | 38.4 |
| HORVU1Hr1G076690.6 | Barley | nucleus | 43.91 | 38.31 |
| KXG33384 | Sorghum | nucleus | 43.09 | 38.25 |
| Zm00001d043431_P012 | Maize | nucleus | 43.42 | 38.15 |
| Zm00001d039006_P007 | Maize | nucleus | 48.03 | 38.02 |
| TraesCS1A01G334900.1 | Wheat | nucleus | 43.91 | 37.77 |
| KXG22343 | Sorghum | nucleus | 41.78 | 37.57 |
| TraesCS1B01G347900.2 | Wheat | nucleus | 43.09 | 37.54 |
| TraesCS3D01G245400.2 | Wheat | nucleus | 45.39 | 36.95 |
| Os01t0753500-01 | Rice | plastid | 44.08 | 36.66 |
| Os05t0515400-01 | Rice | nucleus | 37.34 | 36.5 |
| Zm00001d038698_P001 | Maize | nucleus | 40.62 | 36.32 |
| GSMUA_Achr3P31350_001 | Banana | nucleus | 46.71 | 35.81 |
| AT1G43950.1 | Thale cress | nucleus | 12.83 | 35.14 |
| HORVU1Hr1G087460.6 | Barley | mitochondrion, nucleus | 47.7 | 33.92 |
| AT4G30080.1 | Thale cress | nucleus | 27.14 | 24.63 |
| AT2G28350.1 | Thale cress | nucleus | 27.14 | 23.81 |
| AT1G77850.2 | Thale cress | nucleus | 22.7 | 23.15 |
| ATMG00940.1 | Thale cress | cytosol | 5.26 | 19.51 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | EntrezGene:817956 | ProteinID:AAC23589.1 | ProteinID:AAC69148.1 |
| EMBL:AB199791 | ProteinID:AEC08900.1 | EMBL:AF336917 | EMBL:AF360313 | ProteinID:ANM62186.1 | ArrayExpress:AT2G33860 |
| EnsemblPlantsGene:AT2G33860 | RefSeq:AT2G33860 | TAIR:AT2G33860 | RefSeq:AT2G33860-TAIR-G | EnsemblPlants:AT2G33860.1 | TAIR:AT2G33860.1 |
| EMBL:AY056365 | Unigene:At.10360 | InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | Symbol:ETT |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009791 |
| GO:GO:0009850 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010050 | GO:GO:0010158 | GO:GO:0010582 |
| GO:GO:0030154 | InterPro:IPR003340 | InterPro:IPR015300 | RefSeq:NP_001324363.1 | RefSeq:NP_180942.1 | UniProt:O23661 |
| PFAM:PF02362 | PFAM:PF06507 | PO:PO:0000013 | PO:PO:0000017 | PO:PO:0000037 | PO:PO:0000229 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007130 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020144 | PO:PO:0025022 | PFscan:PS50863 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF5 | SMART:SM01019 | SUPFAM:SSF101936 | EMBL:U89296 | UniParc:UPI00000AADC5 | SEG:seg |
Description
ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
Coordinates
chr2:-:14325206..14328978
Molecular Weight (calculated)
66609.2 Da
IEP (calculated)
6.974
GRAVY (calculated)
-0.389
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.