Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G33860.1 | KRH20373 | AT2G33860.1 | 24485461 |
| AT2G33860.1 | KRH21341 | AT2G33860.1 | 24485461 |
| AT2G33860.1 | KRH50128 | AT2G33860.1 | 24485461 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20373 | Soybean | nucleus | 93.37 | 92.72 |
| KRH10952 | Soybean | nucleus | 32.44 | 79.04 |
| Zm00001d053166_P001 | Maize | nucleus | 16.36 | 78.38 |
| KRH21341 | Soybean | nucleus | 72.92 | 70.24 |
| KRH10951 | Soybean | cytosol, nucleus | 37.94 | 62.85 |
| VIT_10s0003g00420.t01 | Wine grape | nucleus | 62.62 | 57.0 |
| Bra021885.1-P | Field mustard | nucleus | 41.89 | 53.8 |
| Bra005465.1-P | Field mustard | nucleus | 45.84 | 53.72 |
| CDY17209 | Canola | nucleus | 45.42 | 53.49 |
| CDY37679 | Canola | nucleus | 44.57 | 53.2 |
| AT2G33860.1 | Thale cress | nucleus | 45.42 | 52.96 |
| CDY27929 | Canola | nucleus | 44.99 | 52.47 |
| Solyc02g077560.2.1 | Tomato | nucleus | 53.17 | 50.47 |
| PGSC0003DMT400081282 | Potato | nucleus | 53.17 | 50.4 |
| GSMUA_Achr10P... | Banana | nucleus | 40.76 | 50.26 |
| TraesCS3A01G246000.1 | Wheat | nucleus | 43.72 | 46.55 |
| GSMUA_Achr7P11000_001 | Banana | nucleus | 38.79 | 45.99 |
| Os05t0563400-01 | Rice | nucleus | 45.42 | 45.22 |
| EES18676 | Sorghum | nucleus | 46.83 | 44.93 |
| Os01t0670800-02 | Rice | nucleus | 45.42 | 44.85 |
| EES03412 | Sorghum | nucleus | 44.29 | 44.73 |
| TraesCS1D01G404400.1 | Wheat | nucleus | 45.84 | 44.22 |
| TraesCS1B01G424700.1 | Wheat | nucleus | 45.98 | 43.94 |
| TraesCS3B01G273400.2 | Wheat | nucleus | 43.58 | 43.77 |
| TraesCS1A01G396400.1 | Wheat | nucleus | 45.27 | 43.67 |
| Zm00001d043922_P001 | Maize | nucleus | 43.58 | 43.64 |
| GSMUA_Achr4P10590_001 | Banana | nucleus | 43.3 | 43.0 |
| GSMUA_Achr4P02750_001 | Banana | nucleus | 43.44 | 42.9 |
| Zm00001d039006_P007 | Maize | nucleus | 46.12 | 42.58 |
| GSMUA_Achr7P25330_001 | Banana | nucleus | 43.16 | 42.09 |
| TraesCS3D01G245400.2 | Wheat | nucleus | 44.01 | 41.77 |
| HORVU1Hr1G076690.6 | Barley | nucleus | 40.62 | 41.32 |
| TraesCS3A01G292400.1 | Wheat | nucleus | 37.66 | 40.89 |
| TraesCS3B01G327000.1 | Wheat | nucleus | 37.94 | 40.76 |
| Os05t0515400-01 | Rice | nucleus | 35.54 | 40.51 |
| TraesCS1A01G334900.1 | Wheat | nucleus | 40.2 | 40.31 |
| KXG33384 | Sorghum | nucleus | 38.5 | 39.85 |
| TraesCS1D01G337400.1 | Wheat | nucleus | 39.21 | 39.83 |
| TraesCS1B01G347900.2 | Wheat | nucleus | 39.21 | 39.83 |
| HORVU3Hr1G072340.2 | Barley | nucleus | 37.94 | 39.68 |
| Zm00001d012731_P010 | Maize | nucleus | 38.5 | 39.57 |
| TraesCS3D01G292100.1 | Wheat | plastid | 38.65 | 39.54 |
| Zm00001d006004_P001 | Maize | nucleus | 18.76 | 39.47 |
| Zm00001d043431_P012 | Maize | nucleus | 38.36 | 39.31 |
| KXG22343 | Sorghum | nucleus | 37.38 | 39.2 |
| Zm00001d038698_P001 | Maize | nucleus | 37.24 | 38.82 |
| GSMUA_Achr3P31350_001 | Banana | nucleus | 43.16 | 38.59 |
| Os01t0753500-01 | Rice | plastid | 39.07 | 37.89 |
| HORVU1Hr1G087460.6 | Barley | mitochondrion, nucleus | 45.13 | 37.43 |
| KRH25669 | Soybean | cytosol | 5.78 | 36.61 |
| KRH16622 | Soybean | mitochondrion | 6.63 | 35.61 |
| KRH19870 | Soybean | nucleus | 23.13 | 31.91 |
| KRG91907 | Soybean | nucleus | 24.12 | 28.84 |
| KRH34867 | Soybean | nucleus | 24.82 | 28.76 |
| KRH32480 | Soybean | nucleus | 27.08 | 27.43 |
| KRG95987 | Soybean | nucleus | 27.08 | 27.43 |
| KRH18828 | Soybean | nucleus | 21.02 | 27.04 |
| KRH22880 | Soybean | nucleus | 25.39 | 26.87 |
| KRH25023 | Soybean | nucleus | 26.52 | 26.82 |
| KRH29907 | Soybean | nucleus | 26.23 | 26.69 |
| KRH26435 | Soybean | nucleus | 25.81 | 26.14 |
| KRH64757 | Soybean | plastid | 20.31 | 25.62 |
| KRH16623 | Soybean | nucleus | 12.41 | 22.8 |
| KRH19868 | Soybean | nucleus | 0.71 | 5.62 |
Protein Annotations
| EntrezGene:100796970 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | EMBL:ACUP02004664 | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_07G202200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR003340 |
| InterPro:IPR015300 | UniProt:K7L2T6 | EnsemblPlants:KRH50128 | ProteinID:KRH50128 | ProteinID:KRH50128.1 | PFAM:PF02362 |
| PFAM:PF06507 | PFscan:PS50863 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF5 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI00023381F2 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:37124578..37130497
Molecular Weight (calculated)
77938.7 Da
IEP (calculated)
7.117
GRAVY (calculated)
-0.358
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLIDLNNA TEDDEMPSSG SSSTVCLELW HACAGPLISL PKKGSVVVYF PQGHLEQHLH DFPLPASANI PSHVFCRVLD VKLHAEEGSD EVHCQVVLVP
101: ETEQVHQKLR EGEFDADGEE EDAEAVMKST TPHMFCKTLT ASDTSTHGGF SVPRRAAEDC FPPLDYSQQR PSQELVAKDL HGQEWRFRHI YRGQPRRHLL
201: TTGWSAFVNK KKLVSGDAVL FLRGEDGELR LGIRRAAQLK SGSTFSALSG QQLSPTSLMD VVNALSARCA FSIHYNPRVS TSEFIIPIHR FLKSLDYSYS
301: AGMRFRMRFE TEDAAERRFT GLIVGIADVD PVRWPGSKWR CLMVRWDDLE VTRHNRVSPW EIEPSGSAST ANNLMSAGLK RTKIGLPSAK LEFPVSNAIG
401: TSDFGESLRF QKVLQGQEML GVNPTYDSIN AQSHQVSDLR RCYPVSNYPR IAATGNSIGI PQVSSNVSSN GIGFSESFRF QKVLQGQEIF PSQPYGRALS
501: VDEACGNSRC GLFDGYQVMR SRNGWCSDMS NNSSNLHPPV PSGQVSSPSS VLMFQQAVNL VSNSDYNNKI SQVMGGKFHQ RVSYASDVKG GKFVSTPYEP
601: LLCGLAKEGT NSFGLSNFHN QLDSSRSHDS ISVLRANQEL VPSCKSSCRV FGFSLTEVAP IANKEAADSS SVACSGPSFT RHVDDDFHPG HSLRSKAVAS
701: YCTKGVLQY
101: ETEQVHQKLR EGEFDADGEE EDAEAVMKST TPHMFCKTLT ASDTSTHGGF SVPRRAAEDC FPPLDYSQQR PSQELVAKDL HGQEWRFRHI YRGQPRRHLL
201: TTGWSAFVNK KKLVSGDAVL FLRGEDGELR LGIRRAAQLK SGSTFSALSG QQLSPTSLMD VVNALSARCA FSIHYNPRVS TSEFIIPIHR FLKSLDYSYS
301: AGMRFRMRFE TEDAAERRFT GLIVGIADVD PVRWPGSKWR CLMVRWDDLE VTRHNRVSPW EIEPSGSAST ANNLMSAGLK RTKIGLPSAK LEFPVSNAIG
401: TSDFGESLRF QKVLQGQEML GVNPTYDSIN AQSHQVSDLR RCYPVSNYPR IAATGNSIGI PQVSSNVSSN GIGFSESFRF QKVLQGQEIF PSQPYGRALS
501: VDEACGNSRC GLFDGYQVMR SRNGWCSDMS NNSSNLHPPV PSGQVSSPSS VLMFQQAVNL VSNSDYNNKI SQVMGGKFHQ RVSYASDVKG GKFVSTPYEP
601: LLCGLAKEGT NSFGLSNFHN QLDSSRSHDS ISVLRANQEL VPSCKSSCRV FGFSLTEVAP IANKEAADSS SVACSGPSFT RHVDDDFHPG HSLRSKAVAS
701: YCTKGVLQY
001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
Arabidopsis Description
ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.