CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32480	Soybean	nucleus	91.05	66.86
KRG95987	Soybean	nucleus	73.93	54.29
KRG91907	Soybean	nucleus	60.89	52.78
KRH34867	Soybean	nucleus	61.48	51.63
KRH25023	Soybean	nucleus	65.18	47.79
KRH29907	Soybean	nucleus	64.59	47.63
KRH22880	Soybean	nucleus	61.28	47.01
KRH26435	Soybean	nucleus	62.84	46.14
KRH16622	Soybean	mitochondrion	11.67	45.45
KRH25669	Soybean	cytosol	8.95	41.07
KRH64757	Soybean	plastid	41.83	38.26
KRH10952	Soybean	nucleus	21.6	38.14
KRH18828	Soybean	nucleus	39.88	37.21
KRH16623	Soybean	nucleus	25.49	33.94
KRH50128	Soybean	nucleus	31.91	23.13
KRH20373	Soybean	nucleus	31.91	22.97
KRH21341	Soybean	nucleus	31.32	21.88
KRH10951	Soybean	cytosol, nucleus	9.14	10.98
KRH19868	Soybean	nucleus	0.78	4.49

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	EMBL:ACUP02008211	InterPro:Auxin_resp	InterPro:B3_DNA-bd
InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_13G140600	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
UniProt:K7LZP0	ProteinID:KRH19869.1	EnsemblPlants:KRH19870	ProteinID:KRH19870	ProteinID:KRH19870.1	PFAM:PF02362
PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF39	SMART:SM01019	SUPFAM:SSF101936
UniParc:UPI000294EA1F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:25308345..25312385

Molecular Weight (calculated)

57055.3 Da

IEP (calculated)

8.899

GRAVY (calculated)

-0.344

Length

514 amino acids

Sequence
(BLAST)

001: MITFMDTKEK LKEVERCLDP QLWHACAGGM VQMPTVNTKV YYFPQGHAEH ACGPVNFKTC PKVPPFVPCR VVAVKYMADP ETDEVYAKLK LVPLNANDVD
101: YDHDVIGAET RDKPASFAKT LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQNILAK DVHGETWKFR HIYRGTPRRH LLTTGWSTFV NHKKLVAGDS
201: IVFLRAENGD LCVGIRRAKK GIGGGLETSS GWNPAGGNFP MPYSGFSPFL REDDNRILRN GNSNGLNPSV SMMGKGKVRP EAIIEAANLA ANKKPFEVVY
301: YPRASTPEFC VKASLVEAAM QTRWYSGIRF KMAFETEDSS RISWFMGTIS SVQVADPLNW PNSPWRLLQV TWDEPDLLQN VRRVSPWLVE LVSNMPAIHF
401: SPFSPPRKKL RLPQHPDFPL DGQIPLPTLP NNLLGPNNTN QFGCLLESTP AGMQGARHAH YGLSLSDLHL SKLQSGLSSA GFPPLDHAAT PMKVSNNRHC
501: KSLASVRTSL AYYL

Best Arabidopsis Sequence Match ( AT1G77850.2 )
(BLAST)

001: MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQFTPTNY
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQGIFRSL SSTIIN

Arabidopsis Description

ARF17auxin response factor 17 [Source:TAIR;Acc:AT1G77850]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.