CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0167g00010.t01	Wine grape	nucleus	20.62	59.41
VIT_00s1203g00010.t01	Wine grape	cytosol	21.99	53.78
HORVU4Hr1G031990.1	Barley	cytosol	13.06	50.67
HORVU6Hr1G070410.1	Barley	cytosol	16.15	47.96
HORVU4Hr1G080510.1	Barley	cytosol	17.87	46.85
HORVU5Hr1G054640.1	Barley	cytosol	17.87	46.85
KRH21341	Soybean	nucleus	96.22	38.04
KRH16622	Soybean	mitochondrion	16.84	37.12
HORVU1Hr1G049680.1	Barley	cytosol	12.03	32.71
KRH50128	Soybean	nucleus	79.04	32.44
KRH20373	Soybean	nucleus	79.04	32.21
KRH25669	Soybean	cytosol	10.65	27.68
KRH19870	Soybean	nucleus	38.14	21.6
KRH18828	Soybean	nucleus	36.77	19.42
KRG91907	Soybean	nucleus	37.8	18.55
KRH34867	Soybean	nucleus	37.8	17.97
KRH22880	Soybean	nucleus	40.21	17.46
KRH64757	Soybean	plastid	33.68	17.44
KRH29907	Soybean	nucleus	39.86	16.64
KRH26435	Soybean	nucleus	39.86	16.57
KRH25023	Soybean	nucleus	39.52	16.41
KRG95987	Soybean	nucleus	38.83	16.14
KRH32480	Soybean	nucleus	38.83	16.14
KRH16623	Soybean	nucleus	14.43	10.88
KRH19868	Soybean	nucleus	0.0	0.0
KRH10951	Soybean	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.40.330.10	UniProt:A0A0R0G6I8	EMBL:ACUP02009168	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
EnsemblPlantsGene:GLYMA_15G0788001	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlants:KRH10952	ProteinID:KRH10952	ProteinID:KRH10952.1	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31384
PANTHER:PTHR31384:SF5	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0006ED6609	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:-:6052027..6053996

Molecular Weight (calculated)

31817.6 Da

IEP (calculated)

5.905

GRAVY (calculated)

-0.201

Length

291 amino acids

Sequence
(BLAST)

001: MGLIDLNTTE DDEAAPLSAS SSHSGISTSA STLVVSPPPS VCLELWHACA GPLISLPKRG SVVVYLPQGH FEHVQDFPVN AFDIPPHVFC RVLDVKLHAE
101: EGSDEVYCQV LLVPESEQVE HSLREGEIVA DGEEEDTGAT VKSTTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQQRPSQELV AKDLHGLEWR
201: FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGND GELRLGIRRA AQLKWAGSFA VPSGQQLNPA TLMDVVNALS TRCAFSVCYN P

Best Arabidopsis Sequence Match ( AT2G33860.1 )
(BLAST)

001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL

Arabidopsis Description

ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.