Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25023 | Soybean | nucleus | 92.54 | 92.01 |
| KRH26435 | Soybean | nucleus | 74.46 | 74.14 |
| KRH22880 | Soybean | nucleus | 71.02 | 73.88 |
| VIT_06s0004g02750.t01 | Wine grape | nucleus | 69.15 | 67.79 |
| GSMUA_Achr4P18240_001 | Banana | nucleus | 58.11 | 66.72 |
| KRH19868 | Soybean | nucleus | 8.46 | 66.29 |
| GSMUA_Achr8P18930_001 | Banana | nucleus | 54.23 | 65.97 |
| KRH19870 | Soybean | nucleus | 47.63 | 64.59 |
| GSMUA_Achr11P... | Banana | nucleus | 55.81 | 64.4 |
| GSMUA_Achr11P... | Banana | nucleus | 49.64 | 63.96 |
| GSMUA_Achr5P18540_001 | Banana | nucleus | 47.49 | 63.78 |
| GSMUA_Achr5P14630_001 | Banana | nucleus | 50.36 | 63.7 |
| PGSC0003DMT400020874 | Potato | nucleus | 63.85 | 63.66 |
| Solyc11g069500.1.1 | Tomato | nucleus | 63.7 | 63.52 |
| GSMUA_Achr5P03960_001 | Banana | nucleus | 50.79 | 63.33 |
| Zm00001d014013_P002 | Maize | nucleus | 57.25 | 61.96 |
| HORVU4Hr1G078490.1 | Barley | cytosol, nucleus, plastid | 9.9 | 61.61 |
| TraesCS1A01G156600.1 | Wheat | nucleus | 59.68 | 60.47 |
| EER94066 | Sorghum | nucleus | 59.68 | 60.38 |
| TraesCS1D01G155100.1 | Wheat | nucleus | 59.25 | 60.03 |
| CDY15734 | Canola | nucleus | 58.39 | 59.85 |
| TraesCS1B01G173700.1 | Wheat | nucleus | 59.25 | 59.77 |
| Zm00001d032683_P001 | Maize | nucleus | 58.39 | 59.77 |
| CDY04557 | Canola | nucleus | 58.68 | 59.71 |
| HORVU1Hr1G041770.1 | Barley | nucleus | 58.68 | 59.45 |
| KRH32480 | Soybean | nucleus | 59.68 | 59.43 |
| Os06t0685700-01 | Rice | nucleus | 59.68 | 59.43 |
| AT2G28350.1 | Thale cress | nucleus | 58.54 | 58.87 |
| Bra011955.1-P | Field mustard | nucleus | 59.54 | 58.87 |
| TraesCS7B01G346700.1 | Wheat | nucleus | 58.54 | 58.79 |
| TraesCS7D01G436800.1 | Wheat | nucleus | 58.54 | 58.7 |
| EER88840 | Sorghum | nucleus | 59.68 | 58.67 |
| HORVU7Hr1G101270.1 | Barley | nucleus | 58.54 | 58.54 |
| PGSC0003DMT400062489 | Potato | nucleus | 56.67 | 58.43 |
| Solyc06g075150.2.1 | Tomato | nucleus | 56.1 | 58.27 |
| HORVU3Hr1G081710.1 | Barley | cytosol | 8.75 | 58.1 |
| Os10t0479900-01 | Rice | nucleus | 58.11 | 58.02 |
| TraesCS7A01G446900.1 | Wheat | nucleus | 57.96 | 57.63 |
| Zm00001d014507_P002 | Maize | nucleus | 59.25 | 56.97 |
| HORVU5Hr1G024100.1 | Barley | cytosol | 12.34 | 56.95 |
| Zm00001d000358_P001 | Maize | nucleus | 56.24 | 56.0 |
| KRG95987 | Soybean | nucleus | 55.95 | 55.71 |
| Os02t0628600-01 | Rice | nucleus | 53.66 | 54.92 |
| KRG91907 | Soybean | nucleus | 45.91 | 53.96 |
| KRH34867 | Soybean | nucleus | 46.92 | 53.43 |
| Os04t0519700-01 | Rice | nucleus | 29.84 | 53.06 |
| EES05458 | Sorghum | nucleus | 53.8 | 52.97 |
| Zm00001d017284_P001 | Maize | nucleus | 52.94 | 52.19 |
| TraesCS6A01G222300.1 | Wheat | nucleus | 49.07 | 50.89 |
| Zm00001d051172_P001 | Maize | nucleus | 51.51 | 50.49 |
| TraesCS2B01G397300.1 | Wheat | nucleus | 50.93 | 50.14 |
| TraesCS2D01G376600.1 | Wheat | nucleus | 51.22 | 50.0 |
| HORVU2Hr1G089670.1 | Barley | nucleus | 49.5 | 48.59 |
| TraesCS6B01G258800.1 | Wheat | mitochondrion | 51.08 | 47.66 |
| HORVU6Hr1G058890.2 | Barley | mitochondrion | 51.08 | 46.9 |
| TraesCS6D01G212700.1 | Wheat | plastid | 50.93 | 46.16 |
| KRH16622 | Soybean | mitochondrion | 8.61 | 45.45 |
| KXG36152 | Sorghum | nucleus | 42.9 | 45.1 |
| TraesCS2A01G380300.1 | Wheat | nucleus | 25.82 | 44.55 |
| KXG26729 | Sorghum | nucleus, plastid | 45.62 | 44.04 |
| Zm00001d025871_P001 | Maize | nucleus | 35.44 | 42.01 |
| KRH10952 | Soybean | nucleus | 16.64 | 39.86 |
| KRH25669 | Soybean | cytosol | 6.31 | 39.29 |
| KRH18828 | Soybean | nucleus | 30.27 | 38.29 |
| KRH64757 | Soybean | plastid | 30.27 | 37.54 |
| KRH16623 | Soybean | nucleus | 19.66 | 35.49 |
| HORVU7Hr1G021880.1 | Barley | nucleus | 11.19 | 35.29 |
| KRH50128 | Soybean | nucleus | 26.69 | 26.23 |
| KRH20373 | Soybean | nucleus | 26.4 | 25.77 |
| KRH21341 | Soybean | nucleus | 26.4 | 25.0 |
| HORVU2Hr1G089660.8 | Barley | nucleus | 11.33 | 24.31 |
| KRH10951 | Soybean | cytosol, nucleus | 9.9 | 16.12 |
Protein Annotations
| EntrezGene:100810558 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | EMBL:ACUP02006835 |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_11G145500 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1LL50 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlants:KRH29907 |
| ProteinID:KRH29907 | ProteinID:KRH29907.1 | InterPro:PB1_dom | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 |
| PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF27 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000233C539 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:11195651..11199400
Molecular Weight (calculated)
76560.1 Da
IEP (calculated)
7.820
GRAVY (calculated)
-0.324
Length
697 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEGEKVLDP QLWHACAGGM VQMPQVHSKV FYFPQGHAEH AHTTIDLRVP PFILCNVEAV KFMADPETDQ VFAKLSLVPL RNSELGPDSD SAAGDDAAEP
101: SSCEKPASFA KTLTQSDANN GGGFSVPRYC AETIFPRLDC TAEPPVQTVV AKDVHGETWR FRHIYRGTPR RHLLTTGWSS FVNQKKLVAG DSVVFLRAEN
201: GDLCVGIRRA KKGIDEGSGL ASSSVWSSAS GSGIGPFSFF LKEENKMLRN GCGVGGNLSG RVKVRAEDVV EAVTLAASNK AFEVVYYPRA STPEFCVKAS
301: SVGAAMRIQW CSGMRFKMAF ETEDATRISW FMGTIASVQV VDPICWPNSP WRLLQVTWDE PDLLQNVKRV SPWLVELVSN IPLINFTPFS PPRKKLRPQH
401: PDFPLDVQFP IPMLSGNQHG PNSPLCGFSD NAPAGIQGAR HAQFGKSLSD LHLNNNKLQL GMLPTNIHQL GGVYTGISSG NMMTKHDKSK ESLSCFLTMG
501: KSSKSLEKSD DVKKHQFLLF GQPILTEQQI SSCSRDVLSR GKRSLGDEKD KAKCVLDDSQ STLSQQFSPG KASSAEFFWQ LGLDTGHCKV FLESEDVGRT
601: LDLSQFGSYE ELYRRLGNMF GIERSEILNH VLYYDAAGAV KQTGEEPFSD FMKTAKRLTI LTDSGSKNIK RAFITGTRNG EHGLDPSNKT GPLSIFA
101: SSCEKPASFA KTLTQSDANN GGGFSVPRYC AETIFPRLDC TAEPPVQTVV AKDVHGETWR FRHIYRGTPR RHLLTTGWSS FVNQKKLVAG DSVVFLRAEN
201: GDLCVGIRRA KKGIDEGSGL ASSSVWSSAS GSGIGPFSFF LKEENKMLRN GCGVGGNLSG RVKVRAEDVV EAVTLAASNK AFEVVYYPRA STPEFCVKAS
301: SVGAAMRIQW CSGMRFKMAF ETEDATRISW FMGTIASVQV VDPICWPNSP WRLLQVTWDE PDLLQNVKRV SPWLVELVSN IPLINFTPFS PPRKKLRPQH
401: PDFPLDVQFP IPMLSGNQHG PNSPLCGFSD NAPAGIQGAR HAQFGKSLSD LHLNNNKLQL GMLPTNIHQL GGVYTGISSG NMMTKHDKSK ESLSCFLTMG
501: KSSKSLEKSD DVKKHQFLLF GQPILTEQQI SSCSRDVLSR GKRSLGDEKD KAKCVLDDSQ STLSQQFSPG KASSAEFFWQ LGLDTGHCKV FLESEDVGRT
601: LDLSQFGSYE ELYRRLGNMF GIERSEILNH VLYYDAAGAV KQTGEEPFSD FMKTAKRLTI LTDSGSKNIK RAFITGTRNG EHGLDPSNKT GPLSIFA
001: MEQEKSLDPQ LWHACAGSMV QIPSLNSTVF YFAQGHTEHA HAPPDFHAPR VPPLILCRVV SVKFLADAET DEVFAKITLL PLPGNDLDLE NDAVLGLTPP
101: SSDGNGNGKE KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSAEP PVQTVIAKDI HGETWKFRHI YRGTPRRHLL TTGWSTFVNQ KKLIAGDSIV
201: FLRSESGDLC VGIRRAKRGG LGSNAGSDNP YPGFSGFLRD DESTTTTSKL MMMKRNGNND GNAAATGRVR VEAVAEAVAR AACGQAFEVV YYPRASTPEF
301: CVKAADVRSA MRIRWCSGMR FKMAFETEDS SRISWFMGTV SAVQVADPIR WPNSPWRLLQ VAWDEPDLLQ NVKRVSPWLV ELVSNMPTIH LSPFSPRKKI
401: RIPQPFEFPF HGTKFPIFSP GFANNGGGES MCYLSNDNNN APAGIQGARQ AQQLFGSPSP SLLSDLNLSS YTGNNKLHSP AMFLSSFNPR HHHYQARDSE
501: NSNNISCSLT MGNPAMVQDK KKSVGSVKTH QFVLFGQPIL TEQQVMNRKR FLEEEAEAEE EKGLVARGLT WNYSLQGLET GHCKVFMESE DVGRTLDLSV
601: IGSYQELYRK LAEMFHIEER SDLLTHVVYR DANGVIKRIG DEPFSDFMKA TKRLTIKMDI GGDNVRKTWI TGIRTGENGI DASTKTGPLS IFA
101: SSDGNGNGKE KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSAEP PVQTVIAKDI HGETWKFRHI YRGTPRRHLL TTGWSTFVNQ KKLIAGDSIV
201: FLRSESGDLC VGIRRAKRGG LGSNAGSDNP YPGFSGFLRD DESTTTTSKL MMMKRNGNND GNAAATGRVR VEAVAEAVAR AACGQAFEVV YYPRASTPEF
301: CVKAADVRSA MRIRWCSGMR FKMAFETEDS SRISWFMGTV SAVQVADPIR WPNSPWRLLQ VAWDEPDLLQ NVKRVSPWLV ELVSNMPTIH LSPFSPRKKI
401: RIPQPFEFPF HGTKFPIFSP GFANNGGGES MCYLSNDNNN APAGIQGARQ AQQLFGSPSP SLLSDLNLSS YTGNNKLHSP AMFLSSFNPR HHHYQARDSE
501: NSNNISCSLT MGNPAMVQDK KKSVGSVKTH QFVLFGQPIL TEQQVMNRKR FLEEEAEAEE EKGLVARGLT WNYSLQGLET GHCKVFMESE DVGRTLDLSV
601: IGSYQELYRK LAEMFHIEER SDLLTHVVYR DANGVIKRIG DEPFSDFMKA TKRLTIKMDI GGDNVRKTWI TGIRTGENGI DASTKTGPLS IFA
Arabidopsis Description
ARF10Auxin response factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV66]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.