Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G222300.1 | Wheat | nucleus | 85.41 | 94.94 |
| TraesCS6D01G212700.1 | Wheat | plastid | 95.85 | 93.11 |
| HORVU6Hr1G058890.2 | Barley | mitochondrion | 93.84 | 92.36 |
| Os02t0628600-01 | Rice | nucleus | 74.3 | 81.5 |
| EES05458 | Sorghum | nucleus | 72.69 | 76.69 |
| Zm00001d017284_P001 | Maize | nucleus | 71.62 | 75.67 |
| Zm00001d051172_P001 | Maize | nucleus | 70.28 | 73.84 |
| TraesCS2B01G397300.1 | Wheat | nucleus | 61.04 | 64.41 |
| GSMUA_Achr4P18240_001 | Banana | nucleus | 50.74 | 62.44 |
| GSMUA_Achr8P18930_001 | Banana | nucleus | 47.39 | 61.78 |
| GSMUA_Achr11P... | Banana | nucleus | 48.86 | 60.43 |
| GSMUA_Achr11P... | Banana | nucleus | 42.97 | 59.33 |
| GSMUA_Achr5P18540_001 | Banana | nucleus | 40.7 | 58.57 |
| TraesCS7B01G346700.1 | Wheat | nucleus | 54.22 | 58.36 |
| GSMUA_Achr5P14630_001 | Banana | nucleus | 42.97 | 58.26 |
| GSMUA_Achr5P03960_001 | Banana | nucleus | 43.37 | 57.96 |
| VIT_06s0004g02750.t01 | Wine grape | nucleus | 53.01 | 55.7 |
| VIT_08s0040g01810.t01 | Wine grape | nucleus | 46.18 | 55.38 |
| CDY43553 | Canola | nucleus | 44.98 | 54.99 |
| VIT_13s0019g04380.t01 | Wine grape | nucleus | 49.8 | 54.79 |
| CDX68620 | Canola | nucleus | 45.25 | 54.78 |
| Solyc09g007810.2.1 | Tomato | nucleus | 50.47 | 54.32 |
| TraesCS1B01G173700.1 | Wheat | nucleus | 50.07 | 54.12 |
| PGSC0003DMT400055522 | Potato | nucleus | 50.07 | 54.05 |
| KRH32480 | Soybean | nucleus | 50.6 | 54.0 |
| KRH22880 | Soybean | nucleus | 47.92 | 53.43 |
| Solyc11g069500.1.1 | Tomato | nucleus | 49.67 | 53.08 |
| Bra011162.1-P | Field mustard | nucleus | 45.78 | 52.86 |
| PGSC0003DMT400020874 | Potato | nucleus | 49.13 | 52.5 |
| AT4G30080.1 | Thale cress | nucleus | 46.85 | 52.24 |
| KRH26435 | Soybean | nucleus | 48.73 | 52.0 |
| KRG95987 | Soybean | nucleus | 48.46 | 51.71 |
| KRH29907 | Soybean | nucleus | 47.66 | 51.08 |
| KRH25023 | Soybean | nucleus | 47.92 | 51.07 |
| CDY15734 | Canola | nucleus | 46.18 | 50.74 |
| KRH34867 | Soybean | nucleus | 41.5 | 50.65 |
| KRG91907 | Soybean | nucleus | 40.03 | 50.42 |
| CDY04557 | Canola | nucleus | 46.05 | 50.22 |
| AT2G28350.1 | Thale cress | nucleus | 46.32 | 49.93 |
| Solyc06g075150.2.1 | Tomato | nucleus | 44.85 | 49.93 |
| PGSC0003DMT400062489 | Potato | nucleus | 44.58 | 49.26 |
| Bra011955.1-P | Field mustard | nucleus | 46.45 | 49.22 |
| Bra024109.1-P | Field mustard | nucleus | 44.18 | 47.55 |
| Solyc10g086130.1.1 | Tomato | nucleus | 36.14 | 42.79 |
| CDY46728 | Canola | nucleus | 47.52 | 42.06 |
| CDY30172 | Canola | nucleus | 45.25 | 40.72 |
| TraesCS3B01G273400.2 | Wheat | nucleus | 24.36 | 25.78 |
| TraesCS3B01G327000.1 | Wheat | nucleus | 22.49 | 25.45 |
| TraesCS1B01G347900.2 | Wheat | nucleus | 23.43 | 25.07 |
| TraesCS1B01G424700.1 | Wheat | nucleus | 23.96 | 24.12 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:Auxin_resp | InterPro:B3_DNA-bd |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009987 |
| InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02362 | PFAM:PF06507 |
| PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF37 | SMART:SM01019 | SUPFAM:SSF101936 |
| EnsemblPlantsGene:TraesCS6B01G258800 | EnsemblPlants:TraesCS6B01G258800.1 | TIGR:cd10017 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:+:466695618..466698080
Molecular Weight (calculated)
80663.2 Da
IEP (calculated)
8.391
GRAVY (calculated)
-0.359
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGTRSKPFV VRVTAGTAPL VRCSPPLLPP IPTHRATSPS PLPENPPPRS GVGARPMITF ADLTEPAPGA ERRVDRQLWL ACAGGMCTVP PVGCTVYYFP
101: QGHAEHALGL DAGADLSAAR VPALVPCRVA AVRYVADTDT DEVFARIRLA PLGATDADGD IHDDAAAAAD DEQEKPASFS KTLTQSDANN GGGFSVPRYC
201: AETIFPRLDY AADPPVQTVI AKDVHGTAWK FRHIYRGTPR RHLLTTGWSA FVNQKKLVAG DSIVFLRGDG GDLHVGIRRA KRGFCGAEEG SLSLTGWGRY
301: SGPMRGNASP CTRGKVRAED VVEAARLAGS GQPFEVVYFP RASTPEFCVR AAAVRAAMRV QWCPGMRFKM AFETEDSSRI SWFMGTVAGV QVAHPTRWPQ
401: SPWRLLQVTW DEPDLLQNVK RVSPWLVEIV SSMPAMHLAS FSPPRKKSRI PAYPEFPFEG QLLNPSFPPN PMAHGHRRHY HHTDSYHPSF SPFPDCSAPS
501: GIQGARHSQF GPFLSDLHLT HLQSRLMYPG LRCHDHVSPA PIPSRITTDL TIGSSPARNG VSTTLPASAK RPNDAKPPGL VLFGQTILTE QQMSRGDLAG
601: VSSAAATGNS SLNWNTDKAG NASQGSGSTV VQNSGSTDNT SPERPRRFGD NSHVSELGLK PGQCKVFVES DTVGRNLDCS AMSSFEELYG RLSETFCIEG
701: AELRSRVLYR GADGEVKHAG DEPFSEFIKS ARRLTVLTDA GSNNTAS
101: QGHAEHALGL DAGADLSAAR VPALVPCRVA AVRYVADTDT DEVFARIRLA PLGATDADGD IHDDAAAAAD DEQEKPASFS KTLTQSDANN GGGFSVPRYC
201: AETIFPRLDY AADPPVQTVI AKDVHGTAWK FRHIYRGTPR RHLLTTGWSA FVNQKKLVAG DSIVFLRGDG GDLHVGIRRA KRGFCGAEEG SLSLTGWGRY
301: SGPMRGNASP CTRGKVRAED VVEAARLAGS GQPFEVVYFP RASTPEFCVR AAAVRAAMRV QWCPGMRFKM AFETEDSSRI SWFMGTVAGV QVAHPTRWPQ
401: SPWRLLQVTW DEPDLLQNVK RVSPWLVEIV SSMPAMHLAS FSPPRKKSRI PAYPEFPFEG QLLNPSFPPN PMAHGHRRHY HHTDSYHPSF SPFPDCSAPS
501: GIQGARHSQF GPFLSDLHLT HLQSRLMYPG LRCHDHVSPA PIPSRITTDL TIGSSPARNG VSTTLPASAK RPNDAKPPGL VLFGQTILTE QQMSRGDLAG
601: VSSAAATGNS SLNWNTDKAG NASQGSGSTV VQNSGSTDNT SPERPRRFGD NSHVSELGLK PGQCKVFVES DTVGRNLDCS AMSSFEELYG RLSETFCIEG
701: AELRSRVLYR GADGEVKHAG DEPFSEFIKS ARRLTVLTDA GSNNTAS
001: MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQFTPTNY
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQG
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQG
Arabidopsis Description
ARF17auxin response factor 17 [Source:TAIR;Acc:AT1G77850]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.