Factsheet for Os02t0628600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0190300-01
Os01t0236300-01
Os01t0286900-01
Os01t0741900-01
Os02t0228900-01
Os02t0628600-01
Os02t0723400-02
Os04t0519700-01
Os04t0664400-01
Os05t0523300-01
Os06t0685700-01
Os10t0479900-01
Os12t0274700-01
Os12t0291100-01
Os12t0291200-00
Os12t0291400-01
Os12t0292400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28350.1	Os04t0664400-01	AT1G19850.1	22096563
AT2G28350.1	Os01t0236300-01	AT1G34310.1	22096563
AT2G28350.1	Os02t0628600-01	AT2G28350.1	22096563
AT2G28350.1	Os04t0519700-01	AT2G28350.1	22096563
AT2G28350.1	Os06t0685700-01	AT2G28350.1	22096563
AT2G28350.1	Os10t0479900-01	AT2G28350.1	22096563
AT2G28350.1	Os01t0190300-01	AT3G16500.1	21734647
AT2G28350.1	Os01t0741900-01	AT3G16500.1	21734647
AT2G28350.1	Os02t0228900-01	AT3G16500.1	21734647
AT2G28350.1	Os05t0523300-01	AT3G16500.1	21734647
AT2G28350.1	Os01t0236300-01	AT3G61830.1	22096563
AT2G28350.1	Os01t0190300-01	AT5G25890.1	22096563
AT2G28350.1	Os01t0741900-01	AT5G25890.1	22096563
AT2G28350.1	Os02t0228900-01	AT5G25890.1	22096563
AT2G28350.1	Os05t0523300-01	AT5G25890.1	22096563
AT4G30080.1	Os01t0286900-01	AT3G17600.1	21798944
AT4G30080.1	Os02t0723400-02	AT3G17600.1	21798944
AT4G30080.1	Os12t0274700-01	AT5G38420.1	21798944
AT4G30080.1	Os12t0291100-01	AT5G38420.1	21798944
AT4G30080.1	Os12t0291200-00	AT5G38420.1	21798944
AT4G30080.1	Os12t0291400-01	AT5G38420.1	21798944
AT4G30080.1	Os12t0292400-01	AT5G38420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05458	Sorghum	nucleus	85.9	82.63
Zm00001d017284_P001	Maize	nucleus	84.29	81.19
TraesCS6A01G222300.1	Wheat	nucleus	77.68	78.72
Zm00001d051172_P001	Maize	nucleus	81.94	78.48
TraesCS6B01G258800.1	Wheat	mitochondrion	81.5	74.3
TraesCS6D01G212700.1	Wheat	plastid	80.76	71.52
HORVU6Hr1G058890.2	Barley	mitochondrion	79.59	71.41
Os04t0519700-01	Rice	nucleus	38.62	67.09
GSMUA_Achr4P18240_001	Banana	nucleus	58.3	65.4
GSMUA_Achr8P18930_001	Banana	nucleus	53.6	63.7
GSMUA_Achr11P...	Banana	nucleus	55.36	62.42
GSMUA_Achr11P...	Banana	nucleus	48.75	61.37
GSMUA_Achr5P14630_001	Banana	nucleus	49.63	61.34
GSMUA_Achr5P18540_001	Banana	nucleus	46.7	61.27
Os06t0685700-01	Rice	nucleus	62.85	61.14
GSMUA_Achr5P03960_001	Banana	nucleus	49.93	60.82
VIT_08s0040g01810.t01	Wine grape	nucleus	54.48	59.55
VIT_13s0019g04380.t01	Wine grape	nucleus	57.86	58.03
Solyc09g007810.2.1	Tomato	nucleus	59.03	57.93
VIT_06s0004g02750.t01	Wine grape	nucleus	60.06	57.52
PGSC0003DMT400055522	Potato	nucleus	58.44	57.51
KRH32480	Soybean	nucleus	58.3	56.71
CDX68620	Canola	nucleus	51.25	56.56
CDY43553	Canola	nucleus	50.66	56.46
Os10t0479900-01	Rice	nucleus	57.42	56.02
KRG95987	Soybean	nucleus	56.83	55.29
KRH22880	Soybean	nucleus	54.19	55.07
Solyc11g069500.1.1	Tomato	nucleus	56.24	54.79
Bra011162.1-P	Field mustard	nucleus	51.84	54.56
PGSC0003DMT400020874	Potato	nucleus	55.8	54.36
KRH25023	Soybean	nucleus	55.65	54.07
AT4G30080.1	Thale cress	nucleus	53.16	54.03
KRH26435	Soybean	nucleus	55.21	53.71
KRH29907	Soybean	nucleus	54.92	53.66
KRH34867	Soybean	nucleus	47.72	53.1
KRG91907	Soybean	nucleus	45.81	52.61
Solyc06g075150.2.1	Tomato	nucleus	51.54	52.31
CDY15734	Canola	nucleus	52.13	52.21
CDY04557	Canola	nucleus	51.84	51.53
PGSC0003DMT400062489	Potato	nucleus	50.95	51.33
AT2G28350.1	Thale cress	nucleus	52.13	51.23
Bra011955.1-P	Field mustard	nucleus	52.72	50.92
Bra024109.1-P	Field mustard	nucleus	49.78	48.85
Solyc10g086130.1.1	Tomato	nucleus	42.88	46.28
CDY46728	Canola	nucleus	52.28	42.18
CDY30172	Canola	nucleus	50.07	41.08
Os04t0690600-01	Rice	plastid	25.7	33.08
Os05t0563400-01	Rice	nucleus	27.46	26.26
Os01t0670800-02	Rice	nucleus	26.58	25.21
Os01t0753500-01	Rice	plastid	26.58	24.76
Os05t0515400-01	Rice	nucleus	22.61	24.76
Os07t0183700-00	Rice	mitochondrion	13.07	16.98
Os07t0183350-00	Rice	extracellular	14.83	13.25
Os07t0183100-00	Rice	nucleus	5.73	10.89
Os07t0183200-01	Rice	nucleus	1.47	2.46

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EntrezGene:4330045	EMBL:AK243230
InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAD23727.1	ProteinID:BAF09402.2	ProteinID:BAS79879.1	InterPro:DNA-bd_pseudobarrel_sf
ProteinID:EEE57410.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	InterPro:IPR003340
InterPro:IPR015300	EnsemblPlantsGene:Os02g0628600	EnsemblPlants:Os02t0628600-01	InterPro:PB1_dom	PFAM:PF02362	PFAM:PF06507
PFscan:PS50863	PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF37	UniProt:Q6K223	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI00003B0722	RefSeq:XP_015622752.1	SEG:seg	:	:

Description

AUXIN RESPONSE FACTOR 8Similar to Auxin response factor 8. (Os02t0628600-01)

Coordinates

chr2:+:25133526..25136096

Molecular Weight (calculated)

73847.5 Da

IEP (calculated)

7.030

GRAVY (calculated)

-0.294

Length

681 amino acids

Sequence
(BLAST)

001: MITFADLAEP APGAERCVDR QLWLACAGGM CTVPPVGAAV YYFPQGHAEH ALGLAAPELS AARVPALVPC RVASVRYMAD PDTDEVFARI RLVPLRAAED
101: GDVEEDGAAA GEEHEKPASF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YAADPPVQTV VAKDVHGVAW NFRHIYRGTP RRHLLTTGWS TFVNQKKLVA
201: GDSIVFLRGD GGDLHVGIRR AKRGFCGGGG GAEEASLPGW DQYGGLMRGN ASPCAAAKGR GKVRAEDLVE AARLANGGQP FEVVYYPRAS TPEFCVRAAA
301: VRAAMRVQWC PGMRFKMAFE TEDSSRISWF MGTVASVQVA DPIRWPQSPW RLLQVTWDEP DLLQNVKRVS PWLVELVSSM PAINLSSFSP PRKKPRILAY
401: PEFPFEGQLL NPAFPPNPLA HGHHHYHHNH PSFFPFPDVS APAGIQGARH AQFGPSLSDL HLTHLQSSLM YPGLRRPDHV GPTSIPPPRI STDLTMGSSP
501: PARALSMGAK KPDDAKPPGL MLFGQRILTE RQMSLSGTTS PAATGNSSLN WNTEKGASEG SGSGVIQNSP TDNTSSERLQ WFRENSTVSE LGLEPGQCKV
601: FIESDTVGRN LDLSSLASFE QLYGRLSEMF CIDSAELRSR VLYRGATGEV RHAGDEPFSE FIKLARRLTI LTDAGSDNLG S

Best Arabidopsis Sequence Match ( AT4G30080.1 )
(BLAST)

001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV

Arabidopsis Description

ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.