CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19868	Soybean	nucleus	9.43	74.16
KRH19870	Soybean	nucleus	54.29	73.93
KRH32480	Soybean	nucleus	71.43	71.43
VIT_08s0040g01810.t01	Wine grape	nucleus	62.71	70.47
Solyc09g007810.2.1	Tomato	nucleus	68.71	69.31
PGSC0003DMT400055522	Potato	nucleus	68.29	69.08
GSMUA_Achr4P18240_001	Banana	nucleus	58.0	66.89
GSMUA_Achr11P...	Banana	nucleus	50.86	65.8
HORVU4Hr1G078490.1	Barley	cytosol, nucleus, plastid	10.43	65.18
GSMUA_Achr5P03960_001	Banana	nucleus	51.14	64.04
GSMUA_Achr8P18930_001	Banana	nucleus	51.86	63.35
GSMUA_Achr5P18540_001	Banana	nucleus	46.71	63.01
GSMUA_Achr11P...	Banana	nucleus	54.29	62.91
GSMUA_Achr5P14630_001	Banana	nucleus	48.71	61.89
KRH22880	Soybean	nucleus	56.14	58.66
HORVU3Hr1G081710.1	Barley	cytosol	8.71	58.1
KRH26435	Soybean	nucleus	58.0	58.0
TraesCS7B01G346700.1	Wheat	nucleus	57.14	57.64
HORVU5Hr1G024100.1	Barley	cytosol	12.43	57.62
Os06t0685700-01	Rice	nucleus	57.29	57.29
TraesCS1D01G155100.1	Wheat	nucleus	56.29	57.27
TraesCS1A01G156600.1	Wheat	nucleus	56.29	57.27
Zm00001d014013_P002	Maize	nucleus	52.57	57.14
TraesCS7D01G436800.1	Wheat	nucleus	56.71	57.12
HORVU7Hr1G101270.1	Barley	nucleus	56.86	57.1
TraesCS1B01G173700.1	Wheat	nucleus	56.29	57.02
EER94066	Sorghum	nucleus	56.0	56.89
Os02t0628600-01	Rice	nucleus	55.29	56.83
HORVU1Hr1G041770.1	Barley	nucleus	55.71	56.69
KRH25023	Soybean	nucleus	56.71	56.63
TraesCS7A01G446900.1	Wheat	nucleus	56.57	56.49
EER88840	Sorghum	nucleus	57.14	56.42
KRH34867	Soybean	nucleus	49.29	56.37
Zm00001d032683_P001	Maize	nucleus	54.57	56.09
KRG91907	Soybean	nucleus	47.43	55.99
KRH29907	Soybean	nucleus	55.71	55.95
Os10t0479900-01	Rice	nucleus	55.57	55.73
EES05458	Sorghum	nucleus	56.0	55.37
Os04t0519700-01	Rice	nucleus	30.86	55.1
Zm00001d014507_P002	Maize	nucleus	56.71	54.76
Zm00001d000358_P001	Maize	nucleus	54.71	54.71
Zm00001d017284_P001	Maize	nucleus	54.86	54.31
Zm00001d051172_P001	Maize	nucleus	53.0	52.18
TraesCS6A01G222300.1	Wheat	nucleus	49.57	51.64
TraesCS2B01G397300.1	Wheat	nucleus	51.43	50.85
Solyc10g086130.1.1	Tomato	nucleus	45.43	50.4
TraesCS2D01G376600.1	Wheat	nucleus	51.0	50.0
HORVU2Hr1G089670.1	Barley	nucleus	49.71	49.01
TraesCS6B01G258800.1	Wheat	mitochondrion	51.71	48.46
HORVU6Hr1G058890.2	Barley	mitochondrion	51.29	47.3
TraesCS6D01G212700.1	Wheat	plastid	51.71	47.07
KXG36152	Sorghum	nucleus	43.86	46.3
KXG26729	Sorghum	nucleus, plastid	47.0	45.57
TraesCS2A01G380300.1	Wheat	nucleus	25.86	44.8
Zm00001d025871_P001	Maize	nucleus	36.0	42.86
KRH16622	Soybean	mitochondrion	8.0	42.42
KRH25669	Soybean	cytosol	6.71	41.96
KRH18828	Soybean	nucleus	31.14	39.56
HORVU7Hr1G021880.1	Barley	nucleus	12.29	38.91
KRH10952	Soybean	nucleus	16.14	38.83
KRH64757	Soybean	plastid	30.43	37.9
KRH16623	Soybean	nucleus	20.71	37.56
HORVU2Hr1G089660.8	Barley	nucleus	13.0	28.0
KRH50128	Soybean	nucleus	27.43	27.08
KRH20373	Soybean	nucleus	27.14	26.61
KRH21341	Soybean	nucleus	26.71	25.41
KRH10951	Soybean	cytosol, nucleus	10.14	16.59

Protein Annotations

EntrezGene:100791442	MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EMBL:ACUP02012142
InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_19G181900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	UniProt:K7MZ14	EnsemblPlants:KRG95987
ProteinID:KRG95987	ProteinID:KRG95987.1	InterPro:PB1_dom	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863
PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF39	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000294A687
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:44045771..44049869

Molecular Weight (calculated)

77792.8 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.378

Length

700 amino acids

Sequence
(BLAST)

001: MLFQEFAVRT GYCMMESKEK LKEVEKCLDS RLWHACAGGM VQMPVVNAKV FYFPQGHAEH ACGPVDFRVY PKIPPFIQCK VGAIKYMADP ETDEVYVKLR
101: LVPLTRNEGD FEDDAVGGIN GSENKDKSPS FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQN ILAKDVHGET WKFRHIYRGT PRRHLLTTGW
201: SSFVNHKKLV AGDSIVFLRA EKDDLRVGIR RAKRGIGIGG GPEAPAGWNS GGGIRPMPYG GFSAFLREED SQLLRNGLSP NAKGKVRPEA VIEAATLAAN
301: MQPFEVVYYP RASAPEFCVK ANLVRAALQV RWCPGMRFKM PFETEDSSRI SWFMGTISSV NFADPRWPNS PWRLLQVTWD EPELLQNVKR VSPWLVEIVS
401: NMPTIHLSHY STQQKKPRFP QHPDFSFDGQ ISLPAFPSNF LGPSNPFGCL AESTPAGIQG ARHANYGISL SNLHFNKLQS GLFQAGFPPL DHTASPVLRV
501: SSNNAATMQK VGTGDNVSCL LSMSTATQPS KKVDDVKAPQ LVLFGQTILT EQQISLNTSA KTDPTRNNSF DGNADKMCKF SDGFGYALHP QGSSLERLQW
601: YKDQQKETMA SLETGHCKVF MESEDIGRTM DLTMLGSYDE LYRKLADMFG IEKSVVLSHM LYRDTTGAVK HIGDEAFSEF TKTARRLTIL MDSNSDGRGI

Best Arabidopsis Sequence Match ( AT4G30080.1 )
(BLAST)

001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV

Arabidopsis Description

ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.