CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32480	Soybean	nucleus	89.89	11.43
KRG95987	Soybean	nucleus	74.16	9.43
KRH22880	Soybean	nucleus	67.42	8.96
KRH29907	Soybean	nucleus	66.29	8.46
KRH25023	Soybean	nucleus	66.29	8.42
KRH26435	Soybean	nucleus	64.04	8.14
KRH10951	Soybean	cytosol, nucleus	5.62	1.17
KRH19870	Soybean	nucleus	4.49	0.78
KRH50128	Soybean	nucleus	5.62	0.71
KRH20373	Soybean	nucleus	5.62	0.7
KRH21341	Soybean	nucleus	5.62	0.68
KRG91907	Soybean	nucleus	4.49	0.67
KRH34867	Soybean	nucleus	4.49	0.65
KRH16623	Soybean	nucleus	1.12	0.26
KRH18828	Soybean	nucleus	1.12	0.18
KRH64757	Soybean	plastid	1.12	0.18
KRH25669	Soybean	cytosol	0.0	0.0
KRH16622	Soybean	mitochondrion	0.0	0.0
KRH10952	Soybean	nucleus	0.0	0.0

Protein Annotations

EMBL:ACUP02008210	EnsemblPlants:KRH19868	EnsemblPlantsGene:GLYMA_13G140500	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31384	PANTHER:PTHR31384:SF27	PFscan:PS51745
ProteinID:KRH19868	ProteinID:KRH19868.1	UniParc:UPI0002969287	UniProt:K7LZN9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr13:-:25305915..25307109

Molecular Weight (calculated)

10034.1 Da

IEP (calculated)

5.110

GRAVY (calculated)

-0.257

Length

89 amino acids

Sequence
(BLAST)

1: METGHCKVFM ESEDVGRTMD LSLLRSYDEL HRKLADMFGI EKSEMLSRVL YCDSVGAIKH IGDEPFSDFT RTAKRLTILM DSGSNNVGV

Best Arabidopsis Sequence Match ( AT4G30080.1 )
(BLAST)

001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV

Arabidopsis Description

ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.