CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18828	Soybean	nucleus	92.23	64.61
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	41.45	46.11
KRH64757	Soybean	plastid	51.3	35.23
GSMUA_Achr9P29480_001	Banana	nucleus	37.56	32.37
KRH25669	Soybean	cytosol	9.33	32.14
CDX79239	Canola	nucleus	44.56	31.62
Bra003665.1-P	Field mustard	nucleus	44.56	31.5
CDX68039	Canola	nucleus	44.04	31.19
CDX88392	Canola	nucleus	41.45	30.19
GSMUA_Achr6P18900_001	Banana	plastid	31.61	29.68
Bra015651.1-P	Field mustard	nucleus	41.71	29.49
AT1G77850.2	Thale cress	nucleus	43.01	27.85
PGSC0003DMT400071449	Potato	nucleus	24.35	26.04
Solyc11g013480.1.1	Tomato	nucleus	22.8	25.73
KRH19870	Soybean	nucleus	33.94	25.49
GSMUA_Achr10P...	Banana	nucleus	30.31	23.4
KRG91907	Soybean	nucleus	34.46	22.43
KRH34867	Soybean	nucleus	34.2	21.57
TraesCS2D01G577800.1	Wheat	nucleus	28.24	21.25
TraesCS2A01G567300.1	Wheat	nucleus	28.24	21.16
KRG95987	Soybean	nucleus	37.56	20.71
KRH22880	Soybean	nucleus	35.75	20.6
EES13156	Sorghum	nucleus	27.46	20.46
KRH32480	Soybean	nucleus	37.05	20.43
Zm00001d002929_P001	Maize	nucleus	26.68	20.08
KRH25023	Soybean	nucleus	36.01	19.83
KRH26435	Soybean	nucleus	35.75	19.71
KRH29907	Soybean	nucleus	35.49	19.66
Os04t0690600-01	Rice	plastid	26.68	19.47
HORVU2Hr1G125740.1	Barley	nucleus	17.88	17.74
HORVU7Hr1G108360.1	Barley	nucleus	15.29	17.46
Zm00001d026687_P001	Maize	nucleus	20.21	16.88
TraesCS7D01G463000.1	Wheat	nucleus	15.29	16.67
Zm00001d030801_P001	Maize	nucleus	17.88	15.47
Zm00001d030803_P001	Maize	nucleus	12.95	14.71
Zm00001d026694_P001	Maize	nucleus	13.73	14.48
KRH10952	Soybean	nucleus	10.88	14.43
KRH50128	Soybean	nucleus	22.8	12.41
KRH21341	Soybean	nucleus	23.32	12.23
TraesCS7A01G475700.1	Wheat	nucleus	11.4	11.86
TraesCS7A01G475600.1	Wheat	nucleus	11.4	11.76
KRH20373	Soybean	nucleus	21.76	11.76
KRH10951	Soybean	cytosol, nucleus	12.18	10.98
Os07t0183350-00	Rice	extracellular	16.58	8.4
Os07t0183700-00	Rice	mitochondrion	10.62	7.82
KRH19868	Soybean	nucleus	0.26	1.12
Os07t0183200-01	Rice	nucleus	0.52	0.49
Os07t0183100-00	Rice	nucleus	0.26	0.28
KRH16622	Soybean	mitochondrion	0.0	0.0

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	UniProt:A0A0R0GQP7	EMBL:ACUP02008965	InterPro:Auxin_resp
InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_14G1665001	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR003340
InterPro:IPR015300	EnsemblPlants:KRH16623	ProteinID:KRH16623	ProteinID:KRH16623.1	PFAM:PF02362	PFAM:PF06507
PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF38	SUPFAM:SSF101936	UniParc:UPI0006EDAA4C	SEG:seg

Description

hypothetical protein

Coordinates

chr14:+:41162332..41166035

Molecular Weight (calculated)

42354.6 Da

IEP (calculated)

7.308

GRAVY (calculated)

-0.391

Length

386 amino acids

Sequence
(BLAST)

001: ALRHIYRGTP RRHLFTTGWS KFVNHKKLVA GDTVVFVKDS DGRVSVGIRR AARFAAAIET PQPPPAEREG FSRSATGRVT AEAVAAAAES AARNAPFEVV
101: YYPRTGFADF VVSAEVVEES MKCAWVGGMR VKIAMETEDS SRMTWFQGTV SSACASENGP WRMLQVNWDE PEVLQNAKRV SPWQVELVSL PFALHTVYSP
201: NKRLRSDQGS GLLSNREGDP FFPMTGFPNS TMEHMTGFPN STVGHMDKSL LSYDTFPAGM QGARHDLFSP SSFSNFLNDK SYLYMGSGSF GNNPVQSLGT
301: VTTELNMSSS QSDDLSPHSQ SSFHSFAREF AGTRNCDTKV ASGSILLFGK IIQPAESDLH DGDCMERDGS RGSNKLKTVE ACYFSK

Best Arabidopsis Sequence Match ( AT1G77850.1 )
(BLAST)

001: MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQFTPTNY
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQG

Arabidopsis Description

ARF17auxin response factor 17 [Source:TAIR;Acc:AT1G77850]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.