Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21341 | Soybean | nucleus | 87.62 | 50.95 |
| KRH20373 | Soybean | nucleus | 63.55 | 38.1 |
| KRH50128 | Soybean | nucleus | 62.85 | 37.94 |
| KRH16623 | Soybean | nucleus | 10.98 | 12.18 |
| KRH34867 | Soybean | nucleus | 14.72 | 10.29 |
| KRH26435 | Soybean | nucleus | 16.82 | 10.29 |
| KRH22880 | Soybean | nucleus | 15.89 | 10.15 |
| KRG95987 | Soybean | nucleus | 16.59 | 10.14 |
| KRH25023 | Soybean | nucleus | 16.59 | 10.13 |
| KRH29907 | Soybean | nucleus | 16.12 | 9.9 |
| KRH25669 | Soybean | cytosol | 2.57 | 9.82 |
| KRG91907 | Soybean | nucleus | 13.55 | 9.78 |
| KRH19870 | Soybean | nucleus | 10.98 | 9.14 |
| KRH32480 | Soybean | nucleus | 14.95 | 9.14 |
| KRH64757 | Soybean | plastid | 10.51 | 8.01 |
| KRH18828 | Soybean | nucleus | 10.28 | 7.99 |
| HORVU1Hr1G049680.1 | Barley | cytosol | 1.87 | 7.48 |
| KRH19868 | Soybean | nucleus | 1.17 | 5.62 |
| HORVU6Hr1G070410.1 | Barley | cytosol | 0.7 | 3.06 |
| HORVU5Hr1G054640.1 | Barley | cytosol | 0.7 | 2.7 |
| HORVU4Hr1G080510.1 | Barley | cytosol | 0.7 | 2.7 |
| VIT_00s1203g00010.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_03s0167g00010.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| KRH16622 | Soybean | mitochondrion | 0.0 | 0.0 |
| KRH10952 | Soybean | nucleus | 0.0 | 0.0 |
| HORVU4Hr1G031990.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.30.1040 | MapMan:35.1 | UniProt:A0A0R0FYJ5 | EMBL:ACUP02009167 | InterPro:Auxin_resp | EnsemblPlantsGene:GLYMA_15G0788002 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009987 | EnsemblPlants:KRH10951 | ProteinID:KRH10951 |
| ProteinID:KRH10951.1 | PFAM:PF06507 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF5 | UniParc:UPI0006ED9026 | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:-:6049763..6051508
Molecular Weight (calculated)
46976.1 Da
IEP (calculated)
7.001
GRAVY (calculated)
-0.426
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: LDCSYSVGMR FRMRFETEDA ADRRFTGLIA GISDVDPVRW PGSKWRCLLV RWDDIEAARH NRVSPWEIEP SGSASNSSNL MAAGLKRNRI EMTSAKLEFP
101: NPNGIQTSDF GESLRFRKVL QGQEILGVNT PPFDGINAQS PWLYELGRCY PGSNCSGIPP TGNNIRVPHP ASDFSCNGIG FSESFRFQKV LQGQEILPSQ
201: PYGRALSIEE ARANGRYGFY DGCQLLNSRN GWSAQMHDNA SHLHASVTPA QVSSPSSVLM FQQAVNPVSN CDYNINKCNK EMEGRIHYQG LYTSEMKGRT
301: LASSPSDDLI VSRRAPEGAS SIGMFDVHNQ LGSSQLHESV SALRSSQKLV SSCKSSCRLF GFSLTEDTHV ANEEVSASTI TLPLSSGPSF TRLVEDEFHP
401: GHSHPSKAVG SNCTKGVIVH FMVHTDCG
101: NPNGIQTSDF GESLRFRKVL QGQEILGVNT PPFDGINAQS PWLYELGRCY PGSNCSGIPP TGNNIRVPHP ASDFSCNGIG FSESFRFQKV LQGQEILPSQ
201: PYGRALSIEE ARANGRYGFY DGCQLLNSRN GWSAQMHDNA SHLHASVTPA QVSSPSSVLM FQQAVNPVSN CDYNINKCNK EMEGRIHYQG LYTSEMKGRT
301: LASSPSDDLI VSRRAPEGAS SIGMFDVHNQ LGSSQLHESV SALRSSQKLV SSCKSSCRLF GFSLTEDTHV ANEEVSASTI TLPLSSGPSF TRLVEDEFHP
401: GHSHPSKAVG SNCTKGVIVH FMVHTDCG
001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
Arabidopsis Description
ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.