Factsheet for HORVU1Hr1G049680.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G031990.1	Barley	cytosol	63.55	90.67
HORVU4Hr1G080510.1	Barley	cytosol	66.36	63.96
HORVU5Hr1G054640.1	Barley	cytosol	63.55	61.26
HORVU6Hr1G070410.1	Barley	cytosol	54.21	59.18
VIT_03s0167g00010.t01	Wine grape	nucleus	31.78	33.66
VIT_00s1203g00010.t01	Wine grape	cytosol	31.78	28.57
HORVU3Hr1G081710.1	Barley	cytosol	15.89	16.19
HORVU5Hr1G024100.1	Barley	cytosol	19.63	13.91
KRH10952	Soybean	nucleus	32.71	12.03
HORVU4Hr1G078490.1	Barley	cytosol, nucleus, plastid	10.28	9.82
HORVU7Hr1G021880.1	Barley	nucleus	13.08	6.33
HORVU3Hr1G072340.2	Barley	nucleus	38.32	6.05
HORVU1Hr1G076690.6	Barley	nucleus	35.51	5.45
HORVU1Hr1G087460.6	Barley	mitochondrion, nucleus	41.12	5.15
HORVU7Hr1G108360.1	Barley	nucleus	15.89	5.03
HORVU7Hr1G101270.1	Barley	nucleus	32.71	5.02
HORVU1Hr1G041770.1	Barley	nucleus	30.84	4.8
HORVU2Hr1G089670.1	Barley	nucleus	28.04	4.23
HORVU6Hr1G058890.2	Barley	mitochondrion	29.91	4.22
KRH10951	Soybean	cytosol, nucleus	7.48	1.87
HORVU2Hr1G089660.8	Barley	nucleus	2.8	0.92
HORVU6Hr1G026750.1	Barley	cytosol, nucleus, plastid	0.93	0.52
HORVU2Hr1G125740.1	Barley	nucleus	0.93	0.26

Protein Annotations

EnsemblPlants:HORVU1Hr1G049680.1	EnsemblPlantsGene:HORVU1Hr1G049680	Gene3D:2.40.330.10	InterPro:DNA-bd_pseudobarrel_sf	InterPro:IPR015300	PANTHER:PTHR31384
PANTHER:PTHR31384:SF10	SUPFAM:SSF101936	UniParc:UPI000B46238D	UniProt:A0A287FHI8	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:367946769..367947426

Molecular Weight (calculated)

11764.1 Da

IEP (calculated)

8.127

GRAVY (calculated)

-0.097

Length

107 amino acids

Sequence
(BLAST)

001: MHADKDTDEV YAQMTLQPVN SETDVFPIQS LGSYAKSKHP TEYFCKNLTA SDMSTHGGCS VPRRAAGKLF HSWITRCSLL TRSLSCKICM TTCGYFVTFI
101: VVGSNAA

Best Arabidopsis Sequence Match ( AT1G19850.2 )
(BLAST)

001: MKTSCLVNGG GTITTTTSQS TLLEEMKLLK DQSGTRKPVI NSELWHACAG PLVCLPQVGS LVYYFSQGHS EQVAVSTRRS ATTQVPNYPN LPSQLMCQVH
101: NVTLHADKDS DEIYAQMSLQ PVHSERDVFP VPDFGMLRGS KHPTEFFCKT LTASDTSTHG GFSVPRRAAE KLFPPLDYSA QPPTQELVVR DLHENTWTFR
201: HIYRGQPKRH LLTTGWSLFV GSKRLRAGDS VLFIRDEKSQ LMVGVRRANR QQTALPSSVL SADSMHIGVL AAAAHATANR TPFLIFYNPR ACPAEFVIPL
301: AKYRKAICGS QLSVGMRFGM MFETEDSGKR RYMGTIVGIS DLDPLRWPGS KWRNLQVEWD EPGCNDKPTR VSPWDIETPE SLFIFPSLTS GLKRQLHPSY
401: FAGETEWGSL IKRPLIRVPD SANGIMPYAS FPSMASEQLM KMMMRPHNNQ NVPSFMSEMQ QNIVMGNGGL LGDMKMQQPL MMNQKSEMVQ PQNKLTVNPS
501: ASNTSGQEQN LSQSMSAPAK PENSTLSGCS SGRVQHGLEQ SMEQASQVTT STVCNEEKVN QLLQKPGASS PVQADQCLDI THQIYQPQSD PINGFSFLET
601: DELTSQVSSF QSLAGSYKQP FILSSQDSSA VVLPDSTNSP LFHDVWDTQL NGLKFDQFSP LMQQDLYASQ NICMSNSTTS NILDPPLSNT VLDDFCAIKD
701: TDFQNHPSGC LVGNNNTSFA QDVQSQITSA SFADSQAFSR QDFPDNSGGT GTSSSNVDFD DCSLRQNSKG SSWQKIATPR VRTYTKVQKT GSVGRSIDVT
801: SFKDYEELKS AIECMFGLEG LLTHPQSSGW KLVYVDYESD VLLVGDDPWE EFVGCVRCIR ILSPTEVQQM SEEGMKLLNS AGINDLKTSV S

Arabidopsis Description

ARF5Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178W993]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.