Factsheet for HORVU7Hr1G108360.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G463000.1	Wheat	nucleus	64.2	61.3
TraesCS7A01G475700.1	Wheat	nucleus	27.81	25.34
TraesCS7A01G475600.1	Wheat	nucleus	27.81	25.13
HORVU5Hr1G024100.1	Barley	cytosol	10.65	23.84
Solyc11g013480.1.1	Tomato	nucleus	23.96	23.68
KRH16622	Soybean	mitochondrion	9.17	23.48
PGSC0003DMT400071449	Potato	nucleus	23.67	22.16
HORVU3Hr1G081710.1	Barley	cytosol	6.51	20.95
HORVU4Hr1G031990.1	Barley	cytosol	4.14	18.67
KRH18828	Soybean	nucleus	29.88	18.33
HORVU4Hr1G080510.1	Barley	cytosol	5.92	18.02
HORVU5Hr1G054640.1	Barley	cytosol	5.92	18.02
GSMUA_Achr9P29480_001	Banana	nucleus	23.67	17.86
CDX68039	Canola	nucleus	28.7	17.8
Bra003665.1-P	Field mustard	nucleus	28.7	17.77
GSMUA_Achr6P18900_001	Banana	plastid	21.3	17.52
CDX88392	Canola	nucleus	26.92	17.17
CDX79239	Canola	nucleus	27.51	17.1
HORVU4Hr1G078490.1	Barley	cytosol, nucleus, plastid	5.62	16.96
Bra015651.1-P	Field mustard	nucleus	27.22	16.85
ATMG00940.1	Thale cress	cytosol	7.99	16.46
KRH64757	Soybean	plastid	27.22	16.37
HORVU6Hr1G070410.1	Barley	cytosol	4.73	16.33
AT1G77850.2	Thale cress	nucleus	28.11	15.94
HORVU1Hr1G049680.1	Barley	cytosol	5.03	15.89
KRH16623	Soybean	nucleus	17.46	15.29
GSMUA_Achr10P...	Banana	nucleus	22.49	15.2
HORVU7Hr1G101270.1	Barley	nucleus	29.88	14.49
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	14.5	14.12
HORVU1Hr1G041770.1	Barley	nucleus	28.7	14.1
HORVU7Hr1G021880.1	Barley	nucleus	9.17	14.03
HORVU2Hr1G089670.1	Barley	nucleus	28.7	13.66
HORVU6Hr1G058890.2	Barley	mitochondrion	29.88	13.31
Os07t0183700-00	Rice	mitochondrion	19.82	12.79
HORVU2Hr1G089660.8	Barley	nucleus	10.65	11.08
HORVU2Hr1G125740.1	Barley	nucleus	12.72	11.05
HORVU3Hr1G072340.2	Barley	nucleus	21.6	10.77
HORVU1Hr1G076690.6	Barley	nucleus	22.19	10.76
Os07t0183350-00	Rice	extracellular	21.89	9.71
Os07t0183100-00	Rice	nucleus	10.06	9.5
HORVU1Hr1G087460.6	Barley	mitochondrion, nucleus	22.49	8.89
HORVU6Hr1G026750.1	Barley	cytosol, nucleus, plastid	2.07	3.61
Os07t0183200-01	Rice	nucleus	1.18	0.98

Protein Annotations

Gene3D:2.30.30.1040	Gene3D:2.40.330.10	MapMan:35.1	UniProt:A0A287XRM0	InterPro:Auxin_resp	InterPro:B3_DNA-bd
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G108360	EnsemblPlants:HORVU7Hr1G108360.1	InterPro:IPR003340
InterPro:IPR015300	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF19
SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000B465E68	SEG:seg	:	:

Description

Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A287XRM0]

Coordinates

chrchr7H:+:625081856..625084104

Molecular Weight (calculated)

36810.5 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.378

Length

338 amino acids

Sequence
(BLAST)

001: MAAQSTVDRV RAASIVALSR LPPQGTKVCY FARGHAEQWP GTAEPEGHGV PCTVASINYF TDGDEPCARI SLQPQPAADD PPAADDHNPA PPPGRFLFFA
101: KTIQESDKQR CYLGIPKACE AVFLPFQAGQ NEQQLKIQDI SGHSWDMVRK NEGTKRLLKG QWKKFVEHKG VKVKDTILFV SCPPDGEILV DLRLAAPHNI
201: AWGVEEVAEA SQLAIQGNAF TVTYYPGRGV DPFIVPRAVV EAAAGTKWEV DMPVRLRPKD EVVHLQEQEQ GSAAGVTKTG TIAAVNPGTT WRNLQVDWDA
301: STSSTPAAAI NMWQVEPQGT HDAKRRRISH TVPPVAST

Best Arabidopsis Sequence Match ( AT4G30080.1 )
(BLAST)

001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV

Arabidopsis Description

ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.