Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G77850.2 | Thale cress | nucleus | 75.0 | 20.64 |
| GSMUA_Achr6P18900_001 | Banana | plastid | 31.1 | 12.41 |
| GSMUA_Achr9P29480_001 | Banana | nucleus | 32.32 | 11.83 |
| Zm00001d030803_P001 | Maize | nucleus | 21.34 | 10.29 |
| AT4G30080.1 | Thale cress | nucleus | 37.2 | 9.1 |
| Zm00001d030801_P001 | Maize | nucleus | 22.56 | 8.3 |
| HORVU7Hr1G108360.1 | Barley | nucleus | 16.46 | 7.99 |
| AT2G28350.1 | Thale cress | nucleus | 33.54 | 7.94 |
| TraesCS2D01G577800.1 | Wheat | nucleus | 24.39 | 7.8 |
| TraesCS2A01G567300.1 | Wheat | nucleus | 24.39 | 7.77 |
| EES13156 | Sorghum | nucleus | 24.39 | 7.72 |
| TraesCS7D01G463000.1 | Wheat | nucleus | 16.46 | 7.63 |
| Zm00001d026687_P001 | Maize | nucleus | 21.34 | 7.58 |
| HORVU2Hr1G125740.1 | Barley | nucleus | 17.68 | 7.46 |
| GSMUA_Achr10P... | Banana | nucleus | 22.56 | 7.4 |
| Zm00001d002929_P001 | Maize | nucleus | 21.95 | 7.02 |
| TraesCS7A01G475700.1 | Wheat | nucleus | 15.24 | 6.74 |
| TraesCS7A01G475600.1 | Wheat | nucleus | 15.24 | 6.68 |
| Os04t0690600-01 | Rice | plastid | 20.73 | 6.43 |
| Os07t0183700-00 | Rice | mitochondrion | 20.12 | 6.3 |
| AT2G33860.1 | Thale cress | nucleus | 19.51 | 5.26 |
| Zm00001d026694_P001 | Maize | nucleus | 10.37 | 4.64 |
| Os07t0183350-00 | Rice | extracellular | 18.9 | 4.07 |
| AT1G43950.1 | Thale cress | nucleus | 1.83 | 1.35 |
| Os07t0183200-01 | Rice | nucleus | 0.0 | 0.0 |
| Os07t0183100-00 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.30.1040 | MapMan:35.1 | EntrezGene:4025000 | ProteinID:AAM15413.1 | ProteinID:AAM15506.1 | ArrayExpress:ATMG00940 |
| EnsemblPlantsGene:ATMG00940 | RefSeq:ATMG00940 | TAIR:ATMG00940 | RefSeq:ATMG00940-TAIR-G | EnsemblPlants:ATMG00940.1 | TAIR:ATMG00940.1 |
| InterPro:Auxin_resp | ProteinID:CAA69835.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0017004 | GO:GO:0020037 | RefSeq:NP_085549.1 |
| Symbol:ORF164 | UniProt:P92530 | PFAM:PF06507 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF38 | UniParc:UPI000008F5AF |
Description
ORF164Uncharacterized mitochondrial protein AtMg00940 [Source:UniProtKB/Swiss-Prot;Acc:P92530]
Coordinates
chrMt:-:251403..251897
Molecular Weight (calculated)
18341.6 Da
IEP (calculated)
8.374
GRAVY (calculated)
-0.341
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKSADEMFI GVRRAPISSN VGGTSFYGGD EYCSYYQSNG GVAKEDDGSA KKGFRRTGKG KLTAEAVSEA INRAAQGLPF EVVYYPTAGW SDFVVKAEDV
101: EASMAIFWTP GTRVKMAMET EDSSRITWFQ GIVFYTYQET GPWRGSPWNS FRYKIPFTIP LIFL
101: EASMAIFWTP GTRVKMAMET EDSSRITWFQ GIVFYTYQET GPWRGSPWNS FRYKIPFTIP LIFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.