Factsheet for TraesCS7D01G463000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G108360.1	Barley	nucleus	61.3	64.2
TraesCS7A01G475700.1	Wheat	nucleus	25.14	23.99
TraesCS7A01G475600.1	Wheat	nucleus	25.14	23.8
Solyc11g013480.1.1	Tomato	nucleus	22.6	23.39
TraesCS2D01G577800.1	Wheat	nucleus	33.33	23.0
PGSC0003DMT400071449	Potato	nucleus	22.88	22.44
KRH16622	Soybean	mitochondrion	7.91	21.21
GSMUA_Achr9P29480_001	Banana	nucleus	24.01	18.97
KRH18828	Soybean	nucleus	27.68	17.79
CDX68039	Canola	nucleus	27.12	17.61
Bra003665.1-P	Field mustard	nucleus	27.12	17.58
CDX79239	Canola	nucleus	26.55	17.28
CDX88392	Canola	nucleus	25.71	17.17
Bra015651.1-P	Field mustard	nucleus	26.27	17.03
GSMUA_Achr6P18900_001	Banana	plastid	19.77	17.03
KRH64757	Soybean	plastid	26.84	16.9
GSMUA_Achr10P...	Banana	nucleus	23.73	16.8
TraesCS1D01G155100.1	Wheat	nucleus	32.2	16.57
ATMG00940.1	Thale cress	cytosol	7.63	16.46
TraesCS7D01G436800.1	Wheat	nucleus	31.07	15.83
AT1G77850.2	Thale cress	nucleus	26.55	15.77
TraesCS2D01G376600.1	Wheat	nucleus	31.07	15.41
KRH16623	Soybean	nucleus	16.67	15.29
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	14.69	14.99
TraesCS6D01G212700.1	Wheat	plastid	31.64	14.56
Os07t0183700-00	Rice	mitochondrion	18.08	12.21
TraesCS1D01G337400.1	Wheat	nucleus	21.75	11.03
TraesCS1D01G404400.1	Wheat	nucleus	22.32	10.75
TraesCS3D01G245400.2	Wheat	nucleus	22.6	10.71
TraesCS3D01G292100.1	Wheat	plastid	20.62	10.53
Os07t0183350-00	Rice	extracellular	21.47	9.97
Os07t0183100-00	Rice	nucleus	8.47	8.38
Os07t0183200-01	Rice	nucleus	1.13	0.98

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009725	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	PFAM:PF02362
PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384	PANTHER:PTHR31384:SF19	SMART:SM01019	SUPFAM:SSF101936
EnsemblPlantsGene:TraesCS7D01G463000	EnsemblPlants:TraesCS7D01G463000.1	TIGR:cd10017	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:-:578177833..578179047

Molecular Weight (calculated)

38831.8 Da

IEP (calculated)

7.689

GRAVY (calculated)

-0.424

Length

354 amino acids

Sequence
(BLAST)

001: MAAQFPVDGR WVSSVVALSR LPPPGTEAFY FARGHAEQWP HLPAAPEGHA HGVPCEVTAV DYFTDGEEPC ARITLLPRPH NPPPAAIDIP APGRFVFYAK
101: QIQQGDWQRS YFQVPKECER LFPPHQAAGD KQDLLLHDIS GNSWNMEHTH RGATRSLSRD WQDLVHEKGV KVRDIIVFVR CPDGRILVDL RRATPVNRDW
201: GGQEVAQASQ LAIEGGAFTV TYYPGRGGES FVVPRAVVDA AAEREWEVDT PVRLLPKDEV VHVQQQGSAS GVIARGTIGA VVPGATTWRS LQVDWDGSTS
301: STPAVNKWQV EPEGTRDAKR RRLSKTVPPV ASTAQRGVKL FGKTLVPEGS GSRS

Best Arabidopsis Sequence Match ( AT2G28350.1 )
(BLAST)

001: MEQEKSLDPQ LWHACAGSMV QIPSLNSTVF YFAQGHTEHA HAPPDFHAPR VPPLILCRVV SVKFLADAET DEVFAKITLL PLPGNDLDLE NDAVLGLTPP
101: SSDGNGNGKE KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSAEP PVQTVIAKDI HGETWKFRHI YRGTPRRHLL TTGWSTFVNQ KKLIAGDSIV
201: FLRSESGDLC VGIRRAKRGG LGSNAGSDNP YPGFSGFLRD DESTTTTSKL MMMKRNGNND GNAAATGRVR VEAVAEAVAR AACGQAFEVV YYPRASTPEF
301: CVKAADVRSA MRIRWCSGMR FKMAFETEDS SRISWFMGTV SAVQVADPIR WPNSPWRLLQ VAWDEPDLLQ NVKRVSPWLV ELVSNMPTIH LSPFSPRKKI
401: RIPQPFEFPF HGTKFPIFSP GFANNGGGES MCYLSNDNNN APAGIQGARQ AQQLFGSPSP SLLSDLNLSS YTGNNKLHSP AMFLSSFNPR HHHYQARDSE
501: NSNNISCSLT MGNPAMVQDK KKSVGSVKTH QFVLFGQPIL TEQQVMNRKR FLEEEAEAEE EKGLVARGLT WNYSLQGLET GHCKVFMESE DVGRTLDLSV
601: IGSYQELYRK LAEMFHIEER SDLLTHVVYR DANGVIKRIG DEPFSDFMKA TKRLTIKMDI GGDNVRKTWI TGIRTGENGI DASTKTGPLS IFA

Arabidopsis Description

ARF10Auxin response factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV66]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.