Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G33860.1 | KRH20373 | AT2G33860.1 | 24485461 |
| AT2G33860.1 | KRH21341 | AT2G33860.1 | 24485461 |
| AT2G33860.1 | KRH50128 | AT2G33860.1 | 24485461 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10952 | Soybean | nucleus | 38.04 | 96.22 |
| KRH10951 | Soybean | cytosol, nucleus | 50.95 | 87.62 |
| Zm00001d053166_P001 | Maize | nucleus | 15.35 | 76.35 |
| KRH20373 | Soybean | nucleus | 71.06 | 73.25 |
| KRH50128 | Soybean | nucleus | 70.24 | 72.92 |
| VIT_10s0003g00420.t01 | Wine grape | nucleus | 61.41 | 58.02 |
| Bra021885.1-P | Field mustard | nucleus | 41.17 | 54.89 |
| AT2G33860.1 | Thale cress | nucleus | 45.24 | 54.77 |
| Bra005465.1-P | Field mustard | nucleus | 44.84 | 54.55 |
| CDY37679 | Canola | nucleus | 43.89 | 54.38 |
| CDY17209 | Canola | nucleus | 44.29 | 54.15 |
| CDY27929 | Canola | nucleus | 44.43 | 53.78 |
| PGSC0003DMT400081282 | Potato | nucleus | 53.4 | 52.54 |
| Solyc02g077560.2.1 | Tomato | nucleus | 53.12 | 52.34 |
| GSMUA_Achr10P... | Banana | nucleus | 39.27 | 50.26 |
| GSMUA_Achr7P11000_001 | Banana | nucleus | 37.77 | 46.49 |
| Os05t0563400-01 | Rice | nucleus | 44.43 | 45.93 |
| TraesCS3A01G246000.1 | Wheat | nucleus | 41.3 | 45.65 |
| EES03412 | Sorghum | nucleus | 43.34 | 45.44 |
| TraesCS1D01G404400.1 | Wheat | nucleus | 45.24 | 45.31 |
| EES18676 | Sorghum | nucleus | 45.38 | 45.2 |
| TraesCS1B01G424700.1 | Wheat | nucleus | 45.24 | 44.88 |
| GSMUA_Achr4P10590_001 | Banana | nucleus | 43.48 | 44.82 |
| TraesCS1A01G396400.1 | Wheat | nucleus | 44.7 | 44.76 |
| Os01t0670800-02 | Rice | nucleus | 43.61 | 44.71 |
| Zm00001d043922_P001 | Maize | nucleus | 42.93 | 44.63 |
| GSMUA_Achr4P02750_001 | Banana | nucleus | 43.07 | 44.15 |
| TraesCS3B01G273400.2 | Wheat | nucleus | 41.71 | 43.48 |
| Zm00001d039006_P007 | Maize | nucleus | 45.11 | 43.23 |
| TraesCS3A01G292400.1 | Wheat | nucleus | 38.32 | 43.19 |
| GSMUA_Achr7P25330_001 | Banana | nucleus | 42.53 | 43.05 |
| TraesCS3B01G327000.1 | Wheat | nucleus | 38.04 | 42.42 |
| KXG33384 | Sorghum | nucleus | 39.13 | 42.04 |
| HORVU3Hr1G072340.2 | Barley | nucleus | 38.59 | 41.89 |
| HORVU1Hr1G076690.6 | Barley | nucleus | 39.13 | 41.32 |
| TraesCS3D01G292100.1 | Wheat | plastid | 38.86 | 41.27 |
| TraesCS3D01G245400.2 | Wheat | nucleus | 41.85 | 41.23 |
| TraesCS1B01G347900.2 | Wheat | nucleus | 38.99 | 41.12 |
| Zm00001d043431_P012 | Maize | nucleus | 38.59 | 41.04 |
| TraesCS1A01G334900.1 | Wheat | nucleus | 39.27 | 40.88 |
| Zm00001d012731_P010 | Maize | nucleus | 38.32 | 40.87 |
| TraesCS1D01G337400.1 | Wheat | nucleus | 38.45 | 40.54 |
| GSMUA_Achr3P31350_001 | Banana | nucleus | 43.48 | 40.35 |
| KXG22343 | Sorghum | nucleus | 36.82 | 40.09 |
| Zm00001d038698_P001 | Maize | nucleus | 36.68 | 39.71 |
| Os05t0515400-01 | Rice | nucleus | 33.15 | 39.23 |
| Os01t0753500-01 | Rice | plastid | 38.45 | 38.71 |
| Zm00001d006004_P001 | Maize | nucleus | 17.66 | 38.58 |
| KRH25669 | Soybean | cytosol | 5.84 | 38.39 |
| HORVU1Hr1G087460.6 | Barley | mitochondrion, nucleus | 43.89 | 37.78 |
| KRH16622 | Soybean | mitochondrion | 6.52 | 36.36 |
| KRH19870 | Soybean | nucleus | 21.88 | 31.32 |
| KRG91907 | Soybean | nucleus | 23.1 | 28.67 |
| KRH34867 | Soybean | nucleus | 23.64 | 28.43 |
| KRH22880 | Soybean | nucleus | 25.27 | 27.76 |
| KRH18828 | Soybean | nucleus | 20.65 | 27.59 |
| KRH26435 | Soybean | nucleus | 25.54 | 26.86 |
| KRG95987 | Soybean | nucleus | 25.41 | 26.71 |
| KRH25023 | Soybean | nucleus | 25.27 | 26.53 |
| KRH29907 | Soybean | nucleus | 25.0 | 26.4 |
| KRH32480 | Soybean | nucleus | 24.73 | 26.0 |
| KRH64757 | Soybean | plastid | 19.7 | 25.8 |
| KRH16623 | Soybean | nucleus | 12.23 | 23.32 |
| KRH19868 | Soybean | nucleus | 0.68 | 5.62 |
Protein Annotations
| EntrezGene:100789906 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | EMBL:ACUP02008354 | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_13G234200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | UniProt:I1M1Y1 |
| InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlants:KRH21341 | ProteinID:KRH21341 | ProteinID:KRH21341.1 | PFAM:PF02362 |
| PFAM:PF06507 | PFscan:PS50863 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF5 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI000233ADDE | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:34492285..34498651
Molecular Weight (calculated)
80450.8 Da
IEP (calculated)
6.697
GRAVY (calculated)
-0.329
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLIDLNTTE DDEAAPLSAS SPASYSSSSS HSGISTSAST LVVPPTPPSV CLELWHACAG PLISLPKKGS VVVYLPQGHF EHVQDFPVTA YDIPPHVFCR
101: VLDVKLHAEE GSDEVYCQVL LVPESEQVEQ SLREGEIVAD GEEEDTEAIV KSTTPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYS QQRPSQELVA
201: KDLHGLEWRF RHIYRGQPRR HLLTTGWSAF VNKKKLVSGD AVLFLRGDDG ELRLGIRRAA QLKSAGSFAV PSGQQLNPAT LKGVVNALST RCAFSVCYNP
301: RFSSSEFIIP VHKFLKSLDC SYSVGMRFRM RFETEDAAER RCTGLIAGIS DVDPVRWLGS KWRCLLVRWD DIEAARRNRV SPWEIEPSGS ASNSSNLMSA
401: GLKRTRIGMT SVKLEFPTPD GIGASDFGES LRFRKVLQGQ EILGVNTPFD GINAQSPRLY ELGRCYPGSN CSGIPPTGNN IRMPHPASDF SCNGIGFSES
501: FRFQKVLQGQ EILPSQPYGR VLSIEEARAN GCYGLYDGCQ LLNTRNGWSA QMHDNAPYLH ASVTPAQVSS PSSVLMFQQA VNPVSNCDYN KNKRDKEMEG
601: RVHYQGLYTS EVKGRTFASS PFDDPILSTL APEGASSLGM FDVHNQLGSS RPHESVSALR SSQELVSSCK SSCRLFGFSL TEDTHLAKKE ASASTITLPL
701: SSGPSFTRLV EDEFHPGHSL PSKGVGSNCT KGVLQY
101: VLDVKLHAEE GSDEVYCQVL LVPESEQVEQ SLREGEIVAD GEEEDTEAIV KSTTPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYS QQRPSQELVA
201: KDLHGLEWRF RHIYRGQPRR HLLTTGWSAF VNKKKLVSGD AVLFLRGDDG ELRLGIRRAA QLKSAGSFAV PSGQQLNPAT LKGVVNALST RCAFSVCYNP
301: RFSSSEFIIP VHKFLKSLDC SYSVGMRFRM RFETEDAAER RCTGLIAGIS DVDPVRWLGS KWRCLLVRWD DIEAARRNRV SPWEIEPSGS ASNSSNLMSA
401: GLKRTRIGMT SVKLEFPTPD GIGASDFGES LRFRKVLQGQ EILGVNTPFD GINAQSPRLY ELGRCYPGSN CSGIPPTGNN IRMPHPASDF SCNGIGFSES
501: FRFQKVLQGQ EILPSQPYGR VLSIEEARAN GCYGLYDGCQ LLNTRNGWSA QMHDNAPYLH ASVTPAQVSS PSSVLMFQQA VNPVSNCDYN KNKRDKEMEG
601: RVHYQGLYTS EVKGRTFASS PFDDPILSTL APEGASSLGM FDVHNQLGSS RPHESVSALR SSQELVSSCK SSCRLFGFSL TEDTHLAKKE ASASTITLPL
701: SSGPSFTRLV EDEFHPGHSL PSKGVGSNCT KGVLQY
001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
Arabidopsis Description
ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.