Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88840 | Sorghum | nucleus | 84.0 | 82.93 |
| Zm00001d014507_P002 | Maize | nucleus | 82.0 | 79.17 |
| Os06t0685700-01 | Rice | nucleus | 77.86 | 77.86 |
| TraesCS7D01G436800.1 | Wheat | nucleus | 76.29 | 76.83 |
| TraesCS7B01G346700.1 | Wheat | nucleus | 75.71 | 76.37 |
| TraesCS7A01G446900.1 | Wheat | nucleus | 75.29 | 75.18 |
| HORVU7Hr1G101270.1 | Barley | nucleus | 74.43 | 74.75 |
| GSMUA_Achr4P18240_001 | Banana | nucleus | 58.0 | 66.89 |
| GSMUA_Achr5P18540_001 | Banana | nucleus | 47.0 | 63.39 |
| GSMUA_Achr8P18930_001 | Banana | nucleus | 51.57 | 63.0 |
| GSMUA_Achr11P... | Banana | nucleus | 54.29 | 62.91 |
| GSMUA_Achr11P... | Banana | nucleus | 48.0 | 62.11 |
| GSMUA_Achr5P03960_001 | Banana | nucleus | 48.71 | 61.0 |
| Zm00001d014013_P002 | Maize | nucleus | 56.0 | 60.87 |
| GSMUA_Achr5P14630_001 | Banana | nucleus | 47.57 | 60.44 |
| Zm00001d032683_P001 | Maize | nucleus | 57.57 | 59.18 |
| VIT_13s0019g04380.t01 | Wine grape | nucleus | 57.29 | 59.06 |
| VIT_08s0040g01810.t01 | Wine grape | nucleus | 52.29 | 58.75 |
| VIT_06s0004g02750.t01 | Wine grape | nucleus | 59.43 | 58.51 |
| Solyc09g007810.2.1 | Tomato | nucleus | 58.0 | 58.5 |
| CDY43553 | Canola | nucleus | 51.0 | 58.43 |
| Zm00001d017284_P001 | Maize | nucleus | 58.71 | 58.13 |
| KRH22880 | Soybean | nucleus | 55.57 | 58.06 |
| CDX68620 | Canola | nucleus | 51.0 | 57.86 |
| PGSC0003DMT400055522 | Potato | nucleus | 57.14 | 57.8 |
| KRH26435 | Soybean | nucleus | 57.29 | 57.29 |
| KRH25023 | Soybean | nucleus | 56.71 | 56.63 |
| Bra011162.1-P | Field mustard | nucleus | 52.0 | 56.26 |
| Zm00001d051172_P001 | Maize | nucleus | 57.14 | 56.26 |
| KRH29907 | Soybean | nucleus | 56.0 | 56.24 |
| Solyc11g069500.1.1 | Tomato | nucleus | 56.0 | 56.08 |
| AT4G30080.1 | Thale cress | nucleus | 53.57 | 55.97 |
| PGSC0003DMT400020874 | Potato | nucleus | 55.71 | 55.79 |
| KRH32480 | Soybean | nucleus | 55.57 | 55.57 |
| KRG95987 | Soybean | nucleus | 54.71 | 54.71 |
| CDY15734 | Canola | nucleus | 52.43 | 53.97 |
| CDY04557 | Canola | nucleus | 52.71 | 53.87 |
| KRG91907 | Soybean | nucleus | 45.43 | 53.63 |
| Solyc06g075150.2.1 | Tomato | nucleus | 51.29 | 53.5 |
| Bra011955.1-P | Field mustard | nucleus | 53.71 | 53.33 |
| KRH34867 | Soybean | nucleus | 46.43 | 53.1 |
| PGSC0003DMT400062489 | Potato | nucleus | 51.0 | 52.81 |
| AT2G28350.1 | Thale cress | nucleus | 52.14 | 52.67 |
| Bra024109.1-P | Field mustard | nucleus | 49.43 | 49.86 |
| Zm00001d053166_P001 | Maize | nucleus | 10.0 | 47.3 |
| Zm00001d003011_P001 | Maize | nucleus | 13.29 | 46.27 |
| Solyc10g086130.1.1 | Tomato | nucleus | 40.29 | 44.69 |
| CDY46728 | Canola | nucleus | 53.14 | 44.08 |
| Zm00001d025871_P001 | Maize | nucleus | 37.0 | 44.05 |
| CDY30172 | Canola | nucleus | 49.71 | 41.93 |
| Zm00001d002929_P001 | Maize | nucleus | 25.29 | 34.5 |
| Zm00001d026687_P001 | Maize | nucleus | 21.57 | 32.68 |
| Zm00001d030803_P001 | Maize | nucleus | 15.29 | 31.47 |
| Zm00001d026694_P001 | Maize | nucleus | 15.57 | 29.78 |
| Zm00001d030801_P001 | Maize | nucleus | 18.14 | 28.48 |
| Zm00001d043922_P001 | Maize | nucleus | 26.57 | 26.27 |
| Zm00001d023704_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 10.43 | 25.98 |
| Zm00001d038698_P001 | Maize | nucleus | 24.29 | 25.0 |
| Zm00001d039006_P007 | Maize | nucleus | 26.43 | 24.09 |
| Zm00001d006004_P001 | Maize | nucleus | 11.57 | 24.04 |
| Zm00001d043431_P012 | Maize | nucleus | 23.57 | 23.84 |
| Zm00001d012731_P010 | Maize | nucleus | 23.14 | 23.48 |
Protein Annotations
| EntrezGene:100384553 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| InterPro:IPR003340 | InterPro:IPR015300 | UniProt:K7UYC8 | EMBL:KJ727965 | InterPro:PB1_dom | PFAM:PF02362 |
| PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF27 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI000221AB0B | EnsemblPlantsGene:Zm00001d000358 | EnsemblPlants:Zm00001d000358_P001 | EnsemblPlants:Zm00001d000358_T001 | SEG:seg |
Description
ARF-transcription factor 21Auxin response factor 16
Coordinates
chrB73V4_ctg115:-:30305..33567
Molecular Weight (calculated)
75515.5 Da
IEP (calculated)
7.559
GRAVY (calculated)
-0.308
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MITFVDSAAM ELERESGRCL VDPQLWHACA GGMVQMPPVH SRVYYFPQGH AEHAQGHAHA DLPAGRVPAL VLCRVDAVRF LADPDTDEVL ARVRLAPVRP
101: NEPDHADAAA PGAREDKPAS FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT VLAKDVHGVV WKFRHIYRGT PRRHLLTTGW SAFVNQKRLV
201: AGDSIVFMRT GNGDLCVGIR RAKKGGIGGG PEFPHHQPPD GGGYGYGYAG FSTFLRGEED DAAARGKVRV LVRPEEVVEA ANLAASGQPF EVVYYPRAST
301: PEFCVKAGAV RAAMRTQWCA GMRFKMAFET EDSSRISWFM GTVAAVQVAD PIRWPNSPWR LLQVAWDEPD LLQNVKRVSP WLVELVSSTP AIHHLTPFSP
401: PSRKKLCIPL YPEGHQLPAP MFHGSPLVGR GVGPMRYFPD GGTPPAGIQG ARHAQFGISL PDLHHLTRLQ SSLSPHAHGL RHQLDHGARP RIAGGLIVGH
501: PAARDDISCL LTIGTAPHKK PSDVKSAAAA PAPQLMLFGK PILTEQQISL GFRPLPAPKK SPSDDAAETE RTVSNNSDAS SPAGTASGST PSISGGAPSS
601: CQDNKAAATA TATDDDDLLG HCKVFMQSED VGRTLDLSAV ASYEELYQRL ADMFGVDRAE LTSHVFYRDG ASGALKHAGD EPFSEFTKTA RRLTIQTDAR
101: NEPDHADAAA PGAREDKPAS FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT VLAKDVHGVV WKFRHIYRGT PRRHLLTTGW SAFVNQKRLV
201: AGDSIVFMRT GNGDLCVGIR RAKKGGIGGG PEFPHHQPPD GGGYGYGYAG FSTFLRGEED DAAARGKVRV LVRPEEVVEA ANLAASGQPF EVVYYPRAST
301: PEFCVKAGAV RAAMRTQWCA GMRFKMAFET EDSSRISWFM GTVAAVQVAD PIRWPNSPWR LLQVAWDEPD LLQNVKRVSP WLVELVSSTP AIHHLTPFSP
401: PSRKKLCIPL YPEGHQLPAP MFHGSPLVGR GVGPMRYFPD GGTPPAGIQG ARHAQFGISL PDLHHLTRLQ SSLSPHAHGL RHQLDHGARP RIAGGLIVGH
501: PAARDDISCL LTIGTAPHKK PSDVKSAAAA PAPQLMLFGK PILTEQQISL GFRPLPAPKK SPSDDAAETE RTVSNNSDAS SPAGTASGST PSISGGAPSS
601: CQDNKAAATA TATDDDDLLG HCKVFMQSED VGRTLDLSAV ASYEELYQRL ADMFGVDRAE LTSHVFYRDG ASGALKHAGD EPFSEFTKTA RRLTIQTDAR
001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV
Arabidopsis Description
ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.