Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09948 | Soybean | nucleus | 90.17 | 97.5 |
| Solyc03g121060.2.1 | Tomato | nucleus | 49.13 | 59.23 |
| KRH44271 | Soybean | nucleus | 53.47 | 59.11 |
| KRH47203 | Soybean | nucleus | 54.05 | 58.99 |
| PGSC0003DMT400006709 | Potato | nucleus | 47.4 | 57.95 |
| CDY43104 | Canola | nucleus | 41.91 | 54.31 |
| AT3G16500.1 | Thale cress | nucleus | 42.2 | 54.28 |
| GSMUA_Achr3P16300_001 | Banana | endoplasmic reticulum, golgi, mitochondrion, plastid | 34.97 | 53.07 |
| CDY34957 | Canola | nucleus | 41.04 | 52.79 |
| Bra021184.1-P | Field mustard | nucleus | 41.04 | 52.79 |
| CDY64626 | Canola | cytosol | 41.04 | 52.79 |
| CDX87863 | Canola | nucleus | 38.15 | 51.97 |
| AT1G51950.1 | Thale cress | nucleus | 39.6 | 51.31 |
| CDX82399 | Canola | nucleus | 40.17 | 51.1 |
| Bra001634.1-P | Field mustard | nucleus | 40.17 | 51.1 |
| CDY22876 | Canola | nucleus | 37.28 | 50.99 |
| CDX75884 | Canola | cytosol | 39.88 | 50.92 |
| Bra018938.1-P | Field mustard | nucleus | 36.99 | 50.59 |
| TraesCS1A01G122600.2 | Wheat | nucleus | 32.66 | 50.22 |
| Bra022164.1-P | Field mustard | nucleus | 41.33 | 50.18 |
| CDX92077 | Canola | nucleus | 41.33 | 50.18 |
| Bra014303.1-P | Field mustard | nucleus | 39.02 | 50.0 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 63.29 | 49.89 |
| CDY33844 | Canola | nucleus | 36.42 | 49.8 |
| CDY46538 | Canola | nucleus | 38.73 | 49.63 |
| TraesCS1D01G123500.1 | Wheat | nucleus | 32.37 | 49.34 |
| CDY53439 | Canola | nucleus | 38.15 | 48.35 |
| TraesCS3B01G127400.1 | Wheat | nucleus | 30.92 | 46.52 |
| Zm00001d010360_P001 | Maize | cytosol, nucleus | 30.35 | 46.05 |
| Zm00001d039513_P001 | Maize | cytosol, nucleus, plastid | 30.35 | 45.85 |
| Os01t0190300-01 | Rice | nucleus | 31.5 | 45.8 |
| HORVU1Hr1G028170.4 | Barley | cytosol, nucleus, plastid | 32.66 | 45.75 |
| TraesCS3D01G110200.1 | Wheat | nucleus | 29.77 | 44.78 |
| HORVU3Hr1G019750.4 | Barley | cytosol, nucleus, plastid | 31.21 | 44.08 |
| GSMUA_Achr5P09310_001 | Banana | endoplasmic reticulum | 29.77 | 43.83 |
| EES17832 | Sorghum | nucleus | 30.06 | 42.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.15 | 42.86 |
| Os02t0228900-01 | Rice | nucleus | 36.71 | 42.33 |
| TraesCS3A01G108400.1 | Wheat | cytosol, nucleus, peroxisome | 30.64 | 42.06 |
| TraesCS3D01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 40.46 | 41.79 |
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 40.46 | 40.82 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 40.17 | 40.76 |
| OQU84670 | Sorghum | nucleus | 34.39 | 40.75 |
| Os01t0741900-01 | Rice | nucleus | 39.31 | 40.6 |
| Zm00001d037691_P003 | Maize | cytosol, nucleus | 28.61 | 40.08 |
| HORVU3Hr1G070620.5 | Barley | cytosol, mitochondrion, nucleus | 40.17 | 39.38 |
| Os05t0523300-01 | Rice | nucleus | 36.99 | 39.14 |
| Zm00001d016277_P002 | Maize | nucleus | 33.81 | 39.13 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 41.33 | 38.96 |
| TraesCS1B01G356600.1 | Wheat | cytosol | 32.95 | 38.38 |
| TraesCS1A01G343300.1 | Wheat | nucleus | 32.37 | 38.1 |
| TraesCS1D01G345400.1 | Wheat | nucleus | 32.37 | 37.97 |
| KXG33336 | Sorghum | nucleus | 39.31 | 37.26 |
| Zm00001d038784_P001 | Maize | nucleus | 37.57 | 36.83 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 37.57 | 36.41 |
| KXG22376 | Sorghum | nucleus | 36.13 | 36.23 |
| OQU86163 | Sorghum | golgi, plastid | 31.79 | 30.73 |
| KRH32251 | Soybean | nucleus | 25.43 | 30.66 |
| KRH67461 | Soybean | nucleus | 21.68 | 30.61 |
| KRH19625 | Soybean | nucleus | 25.43 | 30.24 |
| KRH33660 | Soybean | plastid | 15.03 | 29.38 |
| KRH69143 | Soybean | plastid | 15.03 | 28.89 |
| KRH68346 | Soybean | plastid | 15.03 | 28.89 |
| KRG96613 | Soybean | plastid | 14.45 | 28.25 |
| KRH03666 | Soybean | cytosol | 15.32 | 26.63 |
| KRH20139 | Soybean | nucleus | 15.61 | 26.21 |
| KRG95739 | Soybean | nucleus | 20.23 | 26.02 |
| KRH52428 | Soybean | nucleus | 15.32 | 23.35 |
| KRH61758 | Soybean | nucleus | 15.03 | 23.01 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 15.9 | 22.54 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 15.61 | 20.77 |
Protein Annotations
| EntrezGene:100799244 | MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | EMBL:ACUP02008462 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_13G354100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1M5G0 | InterPro:IPR000270 | ProteinID:KRH23385.1 | ProteinID:KRH23386.1 | ProteinID:KRH23387.1 |
| EnsemblPlants:KRH23388 | ProteinID:KRH23388 | ProteinID:KRH23388.1 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF2 | SUPFAM:SSF54277 | UniParc:UPI000233B3C0 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:44243093..44247000
Molecular Weight (calculated)
37969.4 Da
IEP (calculated)
8.645
GRAVY (calculated)
-0.804
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MNERSRDEAS PQLLDLISNE REWQMNKRNE GKSSEERKLE LRLGPPGEDW SLGGKMKNNN TEREDQSLLS LGCFSPNINS NAFQSKASHP WPNYHHHGQG
101: NNKKASSSSF LQFPSSTQPV MMGKDASCPK VVVELQQNGG DGKVFSPSSA NTAVSQPNTS QKRTAPAPVV GWPPIRSFRK NLSSSSSASK PPPPPESQAE
201: QQHNKVAGKK PVDNYANNKG LFVKINMDGV PIGRKVDLNA YDSYENLSSA VDELFRGLLA AQRDSSAGGV HNKQEEEKAI TGLLDGSGEF TLVYEDNEGD
301: RMLVGDVPWH MFVSTVKRLR VLKSSELSAF TLGSKQDKIP LDSAMK
101: NNKKASSSSF LQFPSSTQPV MMGKDASCPK VVVELQQNGG DGKVFSPSSA NTAVSQPNTS QKRTAPAPVV GWPPIRSFRK NLSSSSSASK PPPPPESQAE
201: QQHNKVAGKK PVDNYANNKG LFVKINMDGV PIGRKVDLNA YDSYENLSSA VDELFRGLLA AQRDSSAGGV HNKQEEEKAI TGLLDGSGEF TLVYEDNEGD
301: RMLVGDVPWH MFVSTVKRLR VLKSSELSAF TLGSKQDKIP LDSAMK
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.