Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20139 | Soybean | nucleus | 81.91 | 79.13 |
| TraesCS7D01G128200.1 | Wheat | cytosol, mitochondrion | 23.12 | 45.1 |
| TraesCS7A01G129000.1 | Wheat | nucleus | 17.59 | 42.68 |
| PGSC0003DMT400079375 | Potato | cytosol | 40.7 | 40.1 |
| Solyc07g008020.2.1 | Tomato | cytosol | 39.2 | 39.8 |
| VIT_11s0016g05640.t01 | Wine grape | cytosol | 33.17 | 35.87 |
| TraesCS7D01G128100.1 | Wheat | nucleus | 28.64 | 35.62 |
| TraesCS7D01G127900.1 | Wheat | nucleus | 26.63 | 35.33 |
| GSMUA_Achr9P26900_001 | Banana | plastid | 20.6 | 34.45 |
| TraesCS7B01G029000.1 | Wheat | cytosol | 29.15 | 33.72 |
| TraesCS7D01G127800.1 | Wheat | cytosol | 26.63 | 33.54 |
| HORVU7Hr1G026970.2 | Barley | cytosol | 28.14 | 33.33 |
| TraesCS7B01G029100.1 | Wheat | nucleus | 29.15 | 32.77 |
| GSMUA_Achr9P26910_001 | Banana | nucleus | 23.12 | 31.72 |
| TraesCS6D01G357500.1 | Wheat | cytosol, mitochondrion, nucleus | 25.13 | 29.07 |
| KXG19391 | Sorghum | nucleus | 29.65 | 28.92 |
| HORVU6Hr1G088140.2 | Barley | cytosol, mitochondrion, nucleus | 25.13 | 28.74 |
| TraesCS6A01G373300.1 | Wheat | cytosol, nucleus, plastid | 25.13 | 28.57 |
| KXG31308 | Sorghum | cytosol | 28.14 | 28.43 |
| Os02t0805100-01 | Rice | nucleus | 25.63 | 28.02 |
| KRH61758 | Soybean | nucleus | 31.66 | 27.88 |
| Os06t0166500-01 | Rice | nucleus | 25.63 | 27.87 |
| TraesCS6B01G411000.1 | Wheat | cytosol, mitochondrion, nucleus | 24.62 | 27.68 |
| Zm00001d000288_P001 | Maize | cytosol | 27.14 | 27.41 |
| KRH52428 | Soybean | nucleus | 31.16 | 27.31 |
| Zm00001d045203_P001 | Maize | cytosol | 29.15 | 26.85 |
| Zm00001d018414_P001 | Maize | nucleus | 27.64 | 26.7 |
| KRH67461 | Soybean | nucleus | 28.64 | 23.27 |
| KRH19625 | Soybean | nucleus | 31.16 | 21.31 |
| KRH32251 | Soybean | nucleus | 30.15 | 20.91 |
| KRH33660 | Soybean | plastid | 18.59 | 20.9 |
| KRH69143 | Soybean | plastid | 18.09 | 20.0 |
| KRG96613 | Soybean | plastid | 17.09 | 19.21 |
| KRG95739 | Soybean | nucleus | 25.63 | 18.96 |
| KRH68346 | Soybean | plastid | 17.09 | 18.89 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 21.11 | 17.21 |
| KRH09948 | Soybean | nucleus | 27.14 | 16.88 |
| KRH47203 | Soybean | nucleus | 25.13 | 15.77 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 20.6 | 15.77 |
| KRH44271 | Soybean | nucleus | 24.12 | 15.34 |
| KRH23388 | Soybean | nucleus | 26.63 | 15.32 |
Protein Annotations
| EntrezGene:100804096 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02010356 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EMBL:BT096468 | UniProt:C6TFS6 | EnsemblPlantsGene:GLYMA_17G112300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | EnsemblPlants:KRH03666 | ProteinID:KRH03666 |
| ProteinID:KRH03666.1 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF38 |
| SUPFAM:SSF54277 | UniParc:UPI0001B1678B | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:8857447..8858552
Molecular Weight (calculated)
22979.5 Da
IEP (calculated)
7.263
GRAVY (calculated)
-0.595
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MELQLALALP INPTYHKKRT FSQLLMMDHA APPESTLTDH VMLPTLSLLP LTPNHHHDDD HHSQCSNITK DDEEEESVVG WPPVNYHWRK KLRVDEVVGN
101: NNNNNHMVSV ADHRHHSVYV KVKMEGVGIA RKVDLSMHQS FHTLKQTLMD MFGKCNIQQS NNYELAYLDK EGDWLLAQDL PWRSFVGCAR RLKLVKSSR
101: NNNNNHMVSV ADHRHHSVYV KVKMEGVGIA RKVDLSMHQS FHTLKQTLMD MFGKCNIQQS NNYELAYLDK EGDWLLAQDL PWRSFVGCAR RLKLVKSSR
001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSSQVVGW PPIGSHRMNS LVNNQATKSA
101: REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG
201: DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV
101: REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG
201: DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV
Arabidopsis Description
IAA13Auxin-responsive protein IAA13 [Source:UniProtKB/Swiss-Prot;Acc:Q38831]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.