CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19625	Soybean	nucleus	94.43	93.13
KRH67461	Soybean	nucleus	53.66	62.86
VIT_07s0005g04380.t01	Wine grape	nucleus	61.32	57.52
KRG95739	Soybean	nucleus	49.83	53.16
PGSC0003DMT400022133	Potato	nucleus	51.22	46.67
Solyc09g064530.2.1	Tomato	nucleus	50.17	45.0
KRG96613	Soybean	plastid	21.25	34.46
KRH33660	Soybean	plastid	21.25	34.46
KRH68346	Soybean	plastid	21.25	33.89
KRH69143	Soybean	plastid	20.91	33.33
KRH20139	Soybean	nucleus	21.95	30.58
KRH03666	Soybean	cytosol	20.91	30.15
KRH19441	Soybean	endoplasmic reticulum, vacuole	23.34	27.46
KRH09948	Soybean	nucleus	30.31	27.19
KRH23388	Soybean	nucleus	30.66	25.43
KRH02508	Soybean	endoplasmic reticulum, extracellular, plasma membrane	23.0	25.38
KRH47203	Soybean	nucleus	26.83	24.29
KRH52428	Soybean	nucleus	19.16	24.23
KRH44271	Soybean	nucleus	26.13	23.96
KRH61758	Soybean	nucleus	18.47	23.45

Protein Annotations

EntrezGene:100527033	Gene3D:3.10.20.90	MapMan:35.1	UniProt:A0A0R0HY07	EMBL:ACUP02006105	InterPro:AUX/IAA_dom
InterPro:AUX_IAA	EnsemblPlantsGene:GLYMA_10G040400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009734	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000270	EnsemblPlants:KRH32251
ProteinID:KRH32251	ProteinID:KRH32251.1	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF6	SUPFAM:SSF54277	UniParc:UPI00023C9717	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:3557161..3561101

Molecular Weight (calculated)

31133.1 Da

IEP (calculated)

8.116

GRAVY (calculated)

-0.602

Length

287 amino acids

Sequence
(BLAST)

001: MSTVSKDDNL ALSSEDSSCP EESELELGLG LSLSSGSSSK SHHHHHARIY TAKDFPSSAA AAAAAASSPS SSSSSPNNIT AGTKRAAADS LVANNRPSQV
101: VGWPPLRTYR VNSFNSHAKS TEVFNSVAEK SKTDNTVARK TNDNGNDNNI NAKEKRHLRS SLFVKVNMDG IPIGRKVDLS AHSSYETLAQ TLEDMFNEST
201: TVTTCKGSNG EDYGFIIGGE RHSKLLDGSS KFVLTYEDKE GDWMLVGDVP WGMFFSSVRR LRIMRTSEAN GLAPRLEENI KKRCKPI

Best Arabidopsis Sequence Match ( AT4G28640.1 )
(BLAST)

001: MEGGSASGSA SALSNDENLV VSCEDSSSPI GNELELGLTL SLGRKGYRDC RVYADDSSSS SSSSSLSRAS VIAGIKRTAD SMAATSGQVV GWPPIRTYRM
101: NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
201: LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KAQMIL

Arabidopsis Description

IAA11Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A8MR39]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.