CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02508	Soybean	endoplasmic reticulum, extracellular, plasma membrane	91.8	86.15
VIT_05s0020g01070.t01	Wine grape	plastid	48.36	59.6
GSMUA_Achr8P29850_001	Banana	nucleus	40.98	56.82
GSMUA_Achr9P16800_001	Banana	nucleus	38.52	54.02
KRH69143	Soybean	plastid	37.3	50.56
Os01t0286900-01	Rice	nucleus	23.77	50.43
KRH33660	Soybean	plastid	36.48	50.28
KRG96613	Soybean	plastid	36.07	49.72
EES00605	Sorghum	nucleus, plastid	38.52	48.7
KRH68346	Soybean	plastid	35.66	48.33
Zm00001d040541_P001	Maize	nucleus, plastid	32.79	44.2
Os02t0723400-02	Rice	nucleus	34.84	41.46
TraesCS1D01G084100.1	Wheat	nucleus, plastid	33.2	39.13
TraesCS1B01G100300.1	Wheat	plastid	32.79	33.76
TraesCS1A01G082700.2	Wheat	plastid	34.84	32.32
Zm00001d008201_P001	Maize	cytosol	17.21	32.31
HORVU1Hr1G017770.6	Barley	cytosol, mitochondrion, vacuole	24.59	28.99
KRH67461	Soybean	nucleus	26.64	26.53
KRH19625	Soybean	nucleus	27.87	23.37
KRH32251	Soybean	nucleus	27.46	23.34
KRG95739	Soybean	nucleus	24.59	22.3
KRH20139	Soybean	nucleus	18.44	21.84
KRH03666	Soybean	cytosol	17.21	21.11
KRH52428	Soybean	nucleus	19.26	20.7
KRH61758	Soybean	nucleus	18.44	19.91
KRH09948	Soybean	nucleus	22.54	17.19
KRH23388	Soybean	nucleus	22.54	15.9
KRH44271	Soybean	nucleus	20.08	15.65
KRH47203	Soybean	nucleus	19.67	15.14

Protein Annotations

EntrezGene:100818083	Gene3D:3.10.20.90	MapMan:35.1	EMBL:ACUP02008180	InterPro:AUX/IAA_dom	InterPro:AUX_IAA
EnsemblPlantsGene:GLYMA_13G117100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	UniProt:I1LYD6	InterPro:IPR000270	EnsemblPlants:KRH19441	ProteinID:KRH19441	ProteinID:KRH19441.1
InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF3	SUPFAM:SSF54277
TMHMM:TMhelix	UniParc:UPI00023CF25A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:23036846..23038610

Molecular Weight (calculated)

27644.1 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.246

Length

244 amino acids

Sequence
(BLAST)

001: MSDLALLLLI ILSLSFFLFW YKVASVVYIY KDPKVAVFLF SLDQFHSLED MGTLEQIDAP QTRSSSSSSS SIDSNNHPSR TRTPPPSSPS SSACRNRTDL
101: STDLRLGLSI SPSSQSELPF NSTPREESFD WPPIKSILRS TLVGKQSHLS QRPSLFVKVY MEGIPIGRKL NLMAHYSYDG LVKTLGHMFR TNILCPNSQP
201: LNSRNFHVLT YEDQEGDWMM VGDVPWEMFL NSVKRLKITR ADRC

Best Arabidopsis Sequence Match ( AT3G17600.1 )
(BLAST)

001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY

Arabidopsis Description

IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.