Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23388 | Soybean | nucleus | 97.5 | 90.17 |
| Solyc03g121060.2.1 | Tomato | nucleus | 54.06 | 60.28 |
| PGSC0003DMT400006709 | Potato | nucleus | 51.56 | 58.3 |
| KRH47203 | Soybean | nucleus | 57.5 | 58.04 |
| KRH44271 | Soybean | nucleus | 56.56 | 57.83 |
| CDY43104 | Canola | nucleus | 45.31 | 54.31 |
| AT3G16500.1 | Thale cress | nucleus | 45.62 | 54.28 |
| GSMUA_Achr3P16300_001 | Banana | endoplasmic reticulum, golgi, mitochondrion, plastid | 38.12 | 53.51 |
| Bra021184.1-P | Field mustard | nucleus | 44.38 | 52.79 |
| CDY64626 | Canola | cytosol | 44.38 | 52.79 |
| CDY34957 | Canola | nucleus | 44.38 | 52.79 |
| CDX87863 | Canola | nucleus | 41.88 | 52.76 |
| AT1G51950.1 | Thale cress | nucleus | 43.44 | 52.06 |
| TraesCS1A01G122600.2 | Wheat | nucleus | 36.25 | 51.56 |
| CDY22876 | Canola | nucleus | 40.62 | 51.38 |
| Bra018938.1-P | Field mustard | nucleus | 40.31 | 50.99 |
| CDX75884 | Canola | cytosol | 43.12 | 50.92 |
| Bra014303.1-P | Field mustard | nucleus | 42.81 | 50.74 |
| CDX82399 | Canola | nucleus | 43.12 | 50.74 |
| Bra001634.1-P | Field mustard | nucleus | 43.12 | 50.74 |
| TraesCS1D01G123500.1 | Wheat | nucleus | 35.94 | 50.66 |
| CDY46538 | Canola | nucleus | 42.5 | 50.37 |
| CDY33844 | Canola | nucleus | 39.69 | 50.2 |
| CDX92077 | Canola | nucleus | 44.69 | 50.18 |
| Bra022164.1-P | Field mustard | nucleus | 44.69 | 50.18 |
| CDY53439 | Canola | nucleus | 41.88 | 49.08 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 66.88 | 48.75 |
| TraesCS3B01G127400.1 | Wheat | nucleus | 34.06 | 47.39 |
| HORVU1Hr1G028170.4 | Barley | cytosol, nucleus, plastid | 36.25 | 46.96 |
| Zm00001d010360_P001 | Maize | cytosol, nucleus | 33.44 | 46.93 |
| Zm00001d039513_P001 | Maize | cytosol, nucleus, plastid | 33.44 | 46.72 |
| Os01t0190300-01 | Rice | nucleus | 34.69 | 46.64 |
| TraesCS3D01G110200.1 | Wheat | nucleus | 32.81 | 45.65 |
| GSMUA_Achr5P09310_001 | Banana | endoplasmic reticulum | 33.12 | 45.11 |
| HORVU3Hr1G019750.4 | Barley | cytosol, nucleus, plastid | 34.38 | 44.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.19 | 43.83 |
| EES17832 | Sorghum | nucleus | 32.81 | 43.39 |
| Os02t0228900-01 | Rice | nucleus | 40.31 | 43.0 |
| TraesCS3A01G108400.1 | Wheat | cytosol, nucleus, peroxisome | 33.75 | 42.86 |
| TraesCS3D01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 44.38 | 42.39 |
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 44.38 | 41.4 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 44.06 | 41.35 |
| Zm00001d037691_P003 | Maize | cytosol, nucleus | 31.88 | 41.3 |
| OQU84670 | Sorghum | nucleus | 37.5 | 41.1 |
| Os01t0741900-01 | Rice | nucleus | 42.81 | 40.9 |
| HORVU3Hr1G070620.5 | Barley | cytosol, mitochondrion, nucleus | 44.06 | 39.94 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 45.31 | 39.51 |
| Zm00001d016277_P002 | Maize | nucleus | 36.88 | 39.46 |
| Os05t0523300-01 | Rice | nucleus | 40.0 | 39.14 |
| TraesCS1B01G356600.1 | Wheat | cytosol | 35.62 | 38.38 |
| TraesCS1A01G343300.1 | Wheat | nucleus | 35.0 | 38.1 |
| TraesCS1D01G345400.1 | Wheat | nucleus | 35.0 | 37.97 |
| KXG33336 | Sorghum | nucleus | 42.81 | 37.53 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 41.25 | 36.97 |
| Zm00001d038784_P001 | Maize | nucleus | 40.62 | 36.83 |
| KXG22376 | Sorghum | nucleus | 39.38 | 36.52 |
| OQU86163 | Sorghum | golgi, plastid | 35.0 | 31.28 |
| KRH67461 | Soybean | nucleus | 23.44 | 30.61 |
| KRH32251 | Soybean | nucleus | 27.19 | 30.31 |
| KRH19625 | Soybean | nucleus | 27.19 | 29.9 |
| KRH33660 | Soybean | plastid | 16.25 | 29.38 |
| KRH68346 | Soybean | plastid | 16.25 | 28.89 |
| KRH69143 | Soybean | plastid | 16.25 | 28.89 |
| KRG96613 | Soybean | plastid | 15.62 | 28.25 |
| KRH03666 | Soybean | cytosol | 16.88 | 27.14 |
| KRH20139 | Soybean | nucleus | 17.19 | 26.7 |
| KRG95739 | Soybean | nucleus | 21.56 | 25.65 |
| KRH52428 | Soybean | nucleus | 17.19 | 24.23 |
| KRH61758 | Soybean | nucleus | 16.88 | 23.89 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 17.19 | 22.54 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 16.88 | 20.77 |
Protein Annotations
| EntrezGene:100804593 | MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | EMBL:ACUP02009115 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_15G020300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1MCV5 | InterPro:IPR000270 | EnsemblPlants:KRH09948 | ProteinID:KRH09948 | ProteinID:KRH09948.1 |
| ProteinID:KRH09949.1 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF2 |
| SUPFAM:SSF54277 | UniParc:UPI000233B2EB | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:1573643..1577917
Molecular Weight (calculated)
35212.1 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.799
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MDERSRNEAS PQLLDLISNE REWQMNKRNE GKSSEERKLE LRLGPPGEDW SLGGKMKNTE REESLLSLGC FSPNNGFQSK ASPWPNYHHH HQGNNNKASS
101: SSFLQCPKVV VELQNGGDGK VFSPSSANTA VSQPNTSQKR TAPAPVVGWP PIRSFRKNLA SSSSASKPPP ESQAEQHNKV AGKKPVDNYA NNKGLFVKIN
201: MDGVPIGRKV DLNAYDSYEN LSSAVDELFR GLLAAQRDSS AGGVHNKQEE EKAITGLLDG SGEYTLVYED NEGDRMLVGD VPWHMFVSTV KRLRVLKSSE
301: LSAFTLGSKQ DKIPLDSAMK
101: SSFLQCPKVV VELQNGGDGK VFSPSSANTA VSQPNTSQKR TAPAPVVGWP PIRSFRKNLA SSSSASKPPP ESQAEQHNKV AGKKPVDNYA NNKGLFVKIN
201: MDGVPIGRKV DLNAYDSYEN LSSAVDELFR GLLAAQRDSS AGGVHNKQEE EKAITGLLDG SGEYTLVYED NEGDRMLVGD VPWHMFVSTV KRLRVLKSSE
301: LSAFTLGSKQ DKIPLDSAMK
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.