Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 72.88 | 74.51 |
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 60.55 | 64.43 |
| TraesCS3D01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 58.9 | 64.18 |
| Os01t0741900-01 | Rice | nucleus | 58.9 | 64.18 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 59.18 | 63.34 |
| HORVU3Hr1G070620.5 | Barley | cytosol, mitochondrion, nucleus | 60.27 | 62.32 |
| KXG22376 | Sorghum | nucleus | 49.04 | 51.88 |
| CDX87072 | Canola | cytosol | 22.74 | 47.43 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 22.19 | 46.55 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 22.19 | 46.55 |
| AT5G25890.1 | Thale cress | nucleus | 22.19 | 46.29 |
| Bra036557.1-P | Field mustard | nucleus | 22.19 | 46.29 |
| Bra009867.1-P | Field mustard | cytosol | 22.19 | 46.02 |
| Solyc03g121060.2.1 | Tomato | nucleus | 34.52 | 43.9 |
| PGSC0003DMT400006709 | Potato | nucleus | 33.97 | 43.82 |
| KRH09948 | Soybean | nucleus | 37.53 | 42.81 |
| Bra021184.1-P | Field mustard | nucleus | 31.23 | 42.38 |
| CDY34957 | Canola | nucleus | 31.23 | 42.38 |
| CDY19790 | Canola | cytosol | 22.47 | 42.05 |
| AT3G16500.1 | Thale cress | nucleus | 30.96 | 42.01 |
| CDY64626 | Canola | cytosol | 30.96 | 42.01 |
| CDY46538 | Canola | nucleus | 30.96 | 41.85 |
| Bra014303.1-P | Field mustard | nucleus | 30.96 | 41.85 |
| CDX87863 | Canola | nucleus | 28.77 | 41.34 |
| AT1G51950.1 | Thale cress | nucleus | 29.86 | 40.82 |
| CDY22876 | Canola | nucleus | 28.22 | 40.71 |
| CDY43104 | Canola | nucleus | 29.59 | 40.45 |
| Bra018938.1-P | Field mustard | nucleus | 27.95 | 40.32 |
| CDY53439 | Canola | nucleus | 30.14 | 40.29 |
| CDX75884 | Canola | cytosol | 29.86 | 40.22 |
| OQU84670 | Sorghum | nucleus | 32.05 | 40.07 |
| VIT_04s0008g00220.t01 | Wine grape | nucleus | 37.81 | 40.0 |
| Bra001634.1-P | Field mustard | nucleus | 29.59 | 39.71 |
| CDX82399 | Canola | nucleus | 29.59 | 39.71 |
| EES17832 | Sorghum | nucleus | 26.3 | 39.67 |
| KRH23388 | Soybean | nucleus | 37.26 | 39.31 |
| CDX92077 | Canola | nucleus | 30.41 | 38.95 |
| Bra022164.1-P | Field mustard | nucleus | 30.41 | 38.95 |
| CDY33844 | Canola | nucleus | 26.85 | 38.74 |
| KRH44271 | Soybean | nucleus | 33.15 | 38.66 |
| KRH47203 | Soybean | nucleus | 33.15 | 38.17 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 38.36 | 38.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.05 | 37.99 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 37.81 | 31.44 |
| OQU86163 | Sorghum | golgi, plastid | 29.04 | 29.61 |
| EES13224 | Sorghum | nucleus | 17.81 | 26.97 |
| KXG31308 | Sorghum | cytosol | 13.7 | 25.38 |
| KXG19391 | Sorghum | nucleus | 13.97 | 25.0 |
| KXG31359 | Sorghum | cytosol, nucleus, peroxisome | 19.73 | 24.32 |
| EES00605 | Sorghum | nucleus, plastid | 12.6 | 23.83 |
| KXG28215 | Sorghum | nucleus | 18.08 | 18.44 |
Protein Annotations
| MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | UniProt:A0A1B6Q5Z4 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000270 | EnsemblPlants:KXG33336 | ProteinID:KXG33336 | ProteinID:KXG33336.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF90 | EnsemblPlantsGene:SORBI_3003G291200 | SUPFAM:SSF54277 |
| TMHMM:TMhelix | UniParc:UPI000220726B | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:62392736..62395900
Molecular Weight (calculated)
39664.3 Da
IEP (calculated)
9.671
GRAVY (calculated)
-0.515
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSKEREPL PRLLDLIPDG KQCKGREAQG AGRSSRNTGF GSEEDKHLEL KLGPPGLVEQ GATAAASRGI QREIPALSLG CFPHKPSSKP AINTTATGTK
101: RGFLDTIEAK TEGRDEQKQQ AGAGCGKELA LDQKITAASE RKKGFCPPTS QHAPPPAAAT VHDRSHAQGR RSSAPVVGWP PVRSFRRNLA HGSSSKQSIE
201: PQNTEASMKE KLACKKNPLV KINMDGIPIG RKVDLGAYDS YERLSLGVKE LFHGFLEAQK DLSSAGSTQP GATEKIFSQL LDGSGEYTLV YQDNEGDRML
301: VGDVPWNVFV STAKRLRVLR SSELSHGLVG TRAPQVMHAA FSYMFDCSKL SMTFLLMLFL FYRLQ
101: RGFLDTIEAK TEGRDEQKQQ AGAGCGKELA LDQKITAASE RKKGFCPPTS QHAPPPAAAT VHDRSHAQGR RSSAPVVGWP PVRSFRRNLA HGSSSKQSIE
201: PQNTEASMKE KLACKKNPLV KINMDGIPIG RKVDLGAYDS YERLSLGVKE LFHGFLEAQK DLSSAGSTQP GATEKIFSQL LDGSGEYTLV YQDNEGDRML
301: VGDVPWNVFV STAKRLRVLR SSELSHGLVG TRAPQVMHAA FSYMFDCSKL SMTFLLMLFL FYRLQ
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.