CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24390.1	EES01631	AT2G41090.1	17360592
AT4G24390.1	EES09201	AT2G41090.1	17360592
AT4G24390.1	EES16322	AT2G41090.1	17360592
AT4G24390.1	OQU78227	AT2G41090.1	17360592
AT4G24390.1	EES01631	AT2G41100.1	17360592
AT4G24390.1	EES09201	AT2G41100.1	17360592
AT4G24390.1	EES16322	AT2G41100.1	17360592
AT4G24390.1	OQU78227	AT2G41100.1	17360592
AT4G24390.1	KXG37587	AT4G14640.1	17360592
AT4G24390.1	KXG37588	AT4G14640.1	17360592
AT4G24390.1	EES01631	AT5G21274.1	17360592
AT4G24390.1	EES09201	AT5G21274.1	17360592
AT4G24390.1	EES16322	AT5G21274.1	17360592
AT4G24390.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027975_P001	Maize	cytosol	93.52	94.15
Zm00001d048233_P001	Maize	cytosol	92.03	92.64
Os03t0187500-01	Rice	cytosol	35.71	85.32
TraesCS4A01G001800.1	Wheat	cytosol	79.9	79.11
TraesCS4D01G301800.1	Wheat	cytosol, nucleus, peroxisome	80.07	79.02
HORVU4Hr1G078120.4	Barley	cytosol, plastid	78.74	69.5
GSMUA_Achr7P11780_001	Banana	cytosol	56.64	57.8
VIT_18s0001g07120.t01	Wine grape	cytosol	56.15	56.9
KRH52925	Soybean	cytosol	55.32	56.73
PGSC0003DMT400005419	Potato	cytosol	57.31	56.28
KRH62206	Soybean	cytosol	53.99	55.75
Solyc04g074980.2.1	Tomato	cytosol	57.64	55.7
CDY21439	Canola	cytosol	54.49	54.3
Bra000604.1-P	Field mustard	cytosol, plastid	54.32	53.87
CDX83172	Canola	cytosol, plastid	53.82	53.38
KRH72427	Soybean	cytosol	55.32	52.86
CDY03450	Canola	cytosol	53.16	52.46
Bra013798.1-P	Field mustard	cytosol	52.66	52.22
AT5G49980.1	Thale cress	nucleus	53.65	52.18
CDY34286	Canola	cytosol	52.66	52.05
AT4G24390.1	Thale cress	cytosol, plastid	53.49	51.69
KRH16819	Soybean	cytosol	54.65	51.41
EES05842	Sorghum	plastid	56.15	51.06
EES09791	Sorghum	cytosol	42.36	44.12
KXG26136	Sorghum	cytosol	42.36	43.0
KXG21312	Sorghum	plastid	41.69	42.47
EES18318	Sorghum	cytosol	30.4	30.55
EES01769	Sorghum	cytosol	29.73	30.03
EER95129	Sorghum	cytosol	29.24	29.78

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.2.2.1.1	MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	EntrezGene:8057642	UniProt:C5WUV5
EnsemblPlants:EER92735	ProteinID:EER92735	ProteinID:EER92735.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PFAM:PF13516	PANTHER:PTHR43944	PANTHER:PTHR43944:SF4	SMART:SM00367	EnsemblPlantsGene:SORBI_3001G477400	SUPFAM:SSF52047
SUPFAM:SSF81383	UniParc:UPI0001A829D2	RefSeq:XP_002465737.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:74983174..74986891

Molecular Weight (calculated)

66015.2 Da

IEP (calculated)

5.536

GRAVY (calculated)

-0.053

Length

602 amino acids

Sequence
(BLAST)

001: MSEEDEDQPP PKRPTSASPS PTADQVLDNV LETVLQFLDA PRDRSAASLV CRSWHRAESA TRDSVAVRNL LAASATRTAR RFPNARSLLL KGRPRFADFN
101: LLPHGWDASA FRPWAAAVAA GSFPALASLY LKRIPVTDAD LDLLSRSLPA SFRDLTLHLC DGFTSRGLAS IASHCSGLRV LDVVECDMAE EQEGVVDWVA
201: AFPPEPTNLE SLSFECYEPP VDFDALEALV ARSPLLNRLG VNMHVSLGQL RRLMALAPRL SHLGTGSFRP ADGGEEGAGF GEVFSAFVSA GRARTLVSLS
301: GFRDLAQEYL PTIAVVCAHL KSLDLSYTAV TPNQILMFIG QCYNLETLWV LDSVRDEGLE SVGMSCKKLQ SLRVLPLNAR EDADELVSEV GLTAISRGCP
401: ALRSILYFCQ TMTNAAVIAM SRNCPELKVF RLCIMGRHQP DHATGEPMDE GFGAIVQNCS KLTRLSTSGQ LTDRAFEYIG RYGKSLRTLS VAFAGNSDVA
501: LQYILQGCSK LEKLEIRDCP FGDAGLLSGM HHFYNMRFVW MSGCNLTLQG CKEVAQGLPR MVVELINGQP DEKERNESVD ILYMYRSLDG PREDVPPFVK
601: IL

Best Arabidopsis Sequence Match ( AT4G24390.2 )
(BLAST)

001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL

Arabidopsis Description

FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.