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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028543_P001 Maize cytosol 94.92 94.92
Os03t0265500-01 Rice plasma membrane 84.26 84.55
TraesCS4D01G214200.1 Wheat cytosol 82.23 82.94
TraesCS4A01G091200.1 Wheat cytosol 81.56 82.25
TraesCS4B01G213500.1 Wheat cytosol 81.05 81.74
HORVU4Hr1G060950.3 Barley cytosol 80.88 81.57
GSMUA_Achr6P33630_001 Banana cytosol, mitochondrion, nucleus 66.67 67.58
GSMUA_Achr5P28930_001 Banana cytosol 63.45 66.96
GSMUA_Achr9P03690_001 Banana cytosol 66.16 64.84
EES01769 Sorghum cytosol 61.59 61.07
EES18318 Sorghum cytosol 61.59 60.77
VIT_13s0019g03380.t01 Wine grape cytosol 59.9 59.2
KRH73146 Soybean cytosol 57.02 57.71
KRH14993 Soybean cytosol 55.33 57.57
GSMUA_Achr8P02350_001 Banana cytosol 16.75 57.56
KRG97777 Soybean cytosol 57.19 57.29
KRH31107 Soybean cytosol 56.85 56.95
Solyc05g052620.2.1 Tomato cytosol 56.68 55.56
CDY24941 Canola cytosol 54.48 54.58
Bra000156.1-P Field mustard cytosol 54.31 54.41
AT2G39940.1 Thale cress cytosol 54.15 54.05
CDY20501 Canola cytosol 53.81 52.82
Bra005000.1-P Field mustard cytosol 53.64 52.57
CDX74819 Canola cytosol 53.3 52.5
CDX93223 Canola cytosol 50.76 50.76
CDY07041 Canola cytosol 50.25 50.17
CDX93225 Canola cytosol 50.08 49.83
CDY07040 Canola cytosol 50.76 49.42
Bra017045.1-P Field mustard cytosol 50.76 49.42
Bra017044.1-P Field mustard cytosol 50.25 49.17
CDY60996 Canola endoplasmic reticulum, golgi 54.15 45.52
EES09791 Sorghum cytosol 29.61 30.28
KXG26136 Sorghum cytosol 29.44 29.34
EER92735 Sorghum cytosol 29.78 29.24
KXG21312 Sorghum plastid 28.93 28.93
EES05842 Sorghum plastid 30.63 27.34
Protein Annotations
EnsemblPlants:EER95129EnsemblPlantsGene:SORBI_3001G426900EntrezGene:8083719Gene3D:1.20.1280.50Gene3D:3.80.10.10InterPro:IPR032675
InterPro:LRR_dom_sfPANTHER:PTHR43944PANTHER:PTHR43944:SF2ProteinID:EER95129ProteinID:EER95129.1RefSeq:XP_002468131.1
SEG:segSUPFAM:SSF52047unigene:Sbi.17417UniParc:UPI0001A831ACUniProt:C5WQ50MapMan:11.7.2.1.1
Description
hypothetical protein
Coordinates
chr1:-:70618569..70627131
Molecular Weight (calculated)
66744.7 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.117
Length
591 amino acids
Sequence
(BLAST)
001: MGGEAEGGER RLGRVLSFGI PDTALGLVMG YVEDPWDRDA ISLVCRHWCR VDALSRKHVT VAMAYSTTPE RLFRRFPCLE SLKLKAKPRA AMFNLISEDW
101: GGSASPWIQQ LSATFHFLKK LHLRRMIVCD DDINILVRAK AHMLVALKLD RCSGFSTASI ALIARSCKKL ETLFLEESTI DERDNDEWIR ELATSNSVLE
201: TLNFFLTDLR ASPEYLTLLV RNCQRLKTLK ISECFMPDLV SLFRTAQTLQ EFAGGSFEEQ GQPVASRNYE NYYFPPSLHR LSLLYMGTNE MQILFPYAAA
301: LKKLDLQFTF LSTEEHCQIV QRCPNLETLE VRDVIGDRGL QVVAQTCKKL QRLRVERGDD DQGGLEDEQG RISQVGLMAI AQGCPELTYW AIHVSDITNA
401: ALEAVGTCSK NLNDFRLVLL DREAHITELP LDNGVRALLR GCTKLRRFAF YVRPGALSDV GLGYVGEFSK SIRYMLLGNV GESDNGIIQL SKGCPSLQKL
501: ELRGCFFSEH ALAMAALELK SLRYLWVQGF RTSPTGTDLM AMVRPFWNIE YIVPDQDEPC PEHQKQILAY YSLAGRRTDC PPSVTLLYPA F
Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Arabidopsis Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.