Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d028543_P001 | Maize | cytosol | 94.92 | 94.92 |
Os03t0265500-01 | Rice | plasma membrane | 84.26 | 84.55 |
TraesCS4D01G214200.1 | Wheat | cytosol | 82.23 | 82.94 |
TraesCS4A01G091200.1 | Wheat | cytosol | 81.56 | 82.25 |
TraesCS4B01G213500.1 | Wheat | cytosol | 81.05 | 81.74 |
HORVU4Hr1G060950.3 | Barley | cytosol | 80.88 | 81.57 |
GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 66.67 | 67.58 |
GSMUA_Achr5P28930_001 | Banana | cytosol | 63.45 | 66.96 |
GSMUA_Achr9P03690_001 | Banana | cytosol | 66.16 | 64.84 |
EES01769 | Sorghum | cytosol | 61.59 | 61.07 |
EES18318 | Sorghum | cytosol | 61.59 | 60.77 |
VIT_13s0019g03380.t01 | Wine grape | cytosol | 59.9 | 59.2 |
KRH73146 | Soybean | cytosol | 57.02 | 57.71 |
KRH14993 | Soybean | cytosol | 55.33 | 57.57 |
GSMUA_Achr8P02350_001 | Banana | cytosol | 16.75 | 57.56 |
KRG97777 | Soybean | cytosol | 57.19 | 57.29 |
KRH31107 | Soybean | cytosol | 56.85 | 56.95 |
Solyc05g052620.2.1 | Tomato | cytosol | 56.68 | 55.56 |
CDY24941 | Canola | cytosol | 54.48 | 54.58 |
Bra000156.1-P | Field mustard | cytosol | 54.31 | 54.41 |
AT2G39940.1 | Thale cress | cytosol | 54.15 | 54.05 |
CDY20501 | Canola | cytosol | 53.81 | 52.82 |
Bra005000.1-P | Field mustard | cytosol | 53.64 | 52.57 |
CDX74819 | Canola | cytosol | 53.3 | 52.5 |
CDX93223 | Canola | cytosol | 50.76 | 50.76 |
CDY07041 | Canola | cytosol | 50.25 | 50.17 |
CDX93225 | Canola | cytosol | 50.08 | 49.83 |
CDY07040 | Canola | cytosol | 50.76 | 49.42 |
Bra017045.1-P | Field mustard | cytosol | 50.76 | 49.42 |
Bra017044.1-P | Field mustard | cytosol | 50.25 | 49.17 |
CDY60996 | Canola | endoplasmic reticulum, golgi | 54.15 | 45.52 |
EES09791 | Sorghum | cytosol | 29.61 | 30.28 |
KXG26136 | Sorghum | cytosol | 29.44 | 29.34 |
EER92735 | Sorghum | cytosol | 29.78 | 29.24 |
KXG21312 | Sorghum | plastid | 28.93 | 28.93 |
EES05842 | Sorghum | plastid | 30.63 | 27.34 |
Protein Annotations
EnsemblPlants:EER95129 | EnsemblPlantsGene:SORBI_3001G426900 | EntrezGene:8083719 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 |
InterPro:LRR_dom_sf | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF2 | ProteinID:EER95129 | ProteinID:EER95129.1 | RefSeq:XP_002468131.1 |
SEG:seg | SUPFAM:SSF52047 | unigene:Sbi.17417 | UniParc:UPI0001A831AC | UniProt:C5WQ50 | MapMan:11.7.2.1.1 |
Description
hypothetical protein
Coordinates
chr1:-:70618569..70627131
Molecular Weight (calculated)
66744.7 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.117
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGEAEGGER RLGRVLSFGI PDTALGLVMG YVEDPWDRDA ISLVCRHWCR VDALSRKHVT VAMAYSTTPE RLFRRFPCLE SLKLKAKPRA AMFNLISEDW
101: GGSASPWIQQ LSATFHFLKK LHLRRMIVCD DDINILVRAK AHMLVALKLD RCSGFSTASI ALIARSCKKL ETLFLEESTI DERDNDEWIR ELATSNSVLE
201: TLNFFLTDLR ASPEYLTLLV RNCQRLKTLK ISECFMPDLV SLFRTAQTLQ EFAGGSFEEQ GQPVASRNYE NYYFPPSLHR LSLLYMGTNE MQILFPYAAA
301: LKKLDLQFTF LSTEEHCQIV QRCPNLETLE VRDVIGDRGL QVVAQTCKKL QRLRVERGDD DQGGLEDEQG RISQVGLMAI AQGCPELTYW AIHVSDITNA
401: ALEAVGTCSK NLNDFRLVLL DREAHITELP LDNGVRALLR GCTKLRRFAF YVRPGALSDV GLGYVGEFSK SIRYMLLGNV GESDNGIIQL SKGCPSLQKL
501: ELRGCFFSEH ALAMAALELK SLRYLWVQGF RTSPTGTDLM AMVRPFWNIE YIVPDQDEPC PEHQKQILAY YSLAGRRTDC PPSVTLLYPA F
101: GGSASPWIQQ LSATFHFLKK LHLRRMIVCD DDINILVRAK AHMLVALKLD RCSGFSTASI ALIARSCKKL ETLFLEESTI DERDNDEWIR ELATSNSVLE
201: TLNFFLTDLR ASPEYLTLLV RNCQRLKTLK ISECFMPDLV SLFRTAQTLQ EFAGGSFEEQ GQPVASRNYE NYYFPPSLHR LSLLYMGTNE MQILFPYAAA
301: LKKLDLQFTF LSTEEHCQIV QRCPNLETLE VRDVIGDRGL QVVAQTCKKL QRLRVERGDD DQGGLEDEQG RISQVGLMAI AQGCPELTYW AIHVSDITNA
401: ALEAVGTCSK NLNDFRLVLL DREAHITELP LDNGVRALLR GCTKLRRFAF YVRPGALSDV GLGYVGEFSK SIRYMLLGNV GESDNGIIQL SKGCPSLQKL
501: ELRGCFFSEH ALAMAALELK SLRYLWVQGF RTSPTGTDLM AMVRPFWNIE YIVPDQDEPC PEHQKQILAY YSLAGRRTDC PPSVTLLYPA F
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Arabidopsis Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.