Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000156.1-P | Field mustard | cytosol | 99.49 | 99.49 |
| CDX74819 | Canola | cytosol | 91.36 | 89.83 |
| CDY20501 | Canola | cytosol | 91.36 | 89.53 |
| AT2G39940.1 | Thale cress | cytosol | 89.15 | 88.85 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 99.32 | 83.36 |
| CDY07041 | Canola | cytosol | 81.36 | 81.08 |
| CDX93223 | Canola | cytosol | 81.19 | 81.05 |
| CDX93225 | Canola | cytosol | 79.66 | 79.12 |
| CDY07040 | Canola | cytosol | 79.49 | 77.27 |
| KRH31107 | Soybean | cytosol | 69.49 | 69.49 |
| VIT_13s0019g03380.t01 | Wine grape | cytosol | 69.83 | 68.9 |
| KRG97777 | Soybean | cytosol | 68.81 | 68.81 |
| KRH14993 | Soybean | cytosol | 66.1 | 68.66 |
| KRH73146 | Soybean | cytosol | 67.63 | 68.32 |
| Solyc05g052620.2.1 | Tomato | cytosol | 68.14 | 66.67 |
| GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 63.22 | 63.98 |
| GSMUA_Achr5P28930_001 | Banana | cytosol | 60.0 | 63.21 |
| GSMUA_Achr9P03690_001 | Banana | cytosol | 63.39 | 62.02 |
| HORVU4Hr1G060950.3 | Barley | cytosol | 56.27 | 56.66 |
| Os01t0853400-01 | Rice | cytosol | 56.95 | 56.47 |
| Zm00001d042833_P001 | Maize | cytosol | 57.12 | 56.35 |
| TraesCS4A01G091200.1 | Wheat | cytosol | 55.93 | 56.31 |
| TraesCS4B01G213500.1 | Wheat | cytosol | 55.93 | 56.31 |
| TraesCS3A01G367500.1 | Wheat | cytosol | 53.05 | 56.19 |
| TraesCS4D01G214200.1 | Wheat | cytosol | 55.76 | 56.14 |
| Os05t0449500-01 | Rice | cytosol | 56.78 | 56.11 |
| Zm00001d012338_P001 | Maize | cytosol | 56.61 | 56.04 |
| HORVU1Hr1G073230.1 | Barley | cytosol | 56.1 | 56.01 |
| EES18318 | Sorghum | cytosol | 56.78 | 55.93 |
| HORVU3Hr1G085210.2 | Barley | cytosol | 56.27 | 55.89 |
| TraesCS3B01G399200.1 | Wheat | cytosol | 56.27 | 55.89 |
| GSMUA_Achr8P02350_001 | Banana | cytosol | 16.27 | 55.81 |
| TraesCS3D01G360400.2 | Wheat | cytosol | 56.27 | 55.8 |
| EES01769 | Sorghum | cytosol | 56.1 | 55.54 |
| Zm00001d038273_P001 | Maize | cytosol | 56.27 | 55.43 |
| Zm00001d010082_P001 | Maize | cytosol | 56.27 | 55.43 |
| TraesCS1D01G278400.1 | Wheat | cytosol | 55.59 | 55.41 |
| TraesCS1B01G288100.1 | Wheat | cytosol | 55.42 | 55.24 |
| Os03t0265500-01 | Rice | plasma membrane | 54.92 | 55.01 |
| TraesCS1A01G279100.1 | Wheat | cytosol | 55.08 | 54.9 |
| EER95129 | Sorghum | cytosol | 54.58 | 54.48 |
| Zm00001d028543_P001 | Maize | cytosol | 54.07 | 53.98 |
| Zm00001d047848_P001 | Maize | cytosol | 53.9 | 53.81 |
| CDY68868 | Canola | cytosol | 30.68 | 33.52 |
| CDY53998 | Canola | cytosol | 31.86 | 32.19 |
| CDY34211 | Canola | cytosol | 30.68 | 31.48 |
| CDY28523 | Canola | cytosol | 30.51 | 31.3 |
| CDY26594 | Canola | cytosol | 30.51 | 31.14 |
| CDX71968 | Canola | cytosol | 30.51 | 31.14 |
| CDY16034 | Canola | cytosol | 30.51 | 31.09 |
| CDY11468 | Canola | cytosol | 31.19 | 30.92 |
| CDX76680 | Canola | cytosol | 31.02 | 30.76 |
| CDY53774 | Canola | cytosol | 30.51 | 30.72 |
| CDY21068 | Canola | cytosol | 30.68 | 30.68 |
| CDY31282 | Canola | cytosol | 30.34 | 30.49 |
| CDX90899 | Canola | cytosol | 30.0 | 30.2 |
| CDY21439 | Canola | cytosol | 30.51 | 29.8 |
| CDY34286 | Canola | cytosol | 30.51 | 29.56 |
| CDY03450 | Canola | cytosol | 30.51 | 29.51 |
| CDX83172 | Canola | cytosol, plastid | 30.34 | 29.49 |
| CDX67912 | Canola | endoplasmic reticulum, golgi | 32.03 | 29.3 |
| CDX89163 | Canola | cytosol | 30.0 | 28.27 |
| CDY21947 | Canola | plastid, vacuole | 29.66 | 27.96 |
| CDY22108 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 29.83 | 27.54 |
| CDX97301 | Canola | cytosol | 4.07 | 26.09 |
Protein Annotations
| EnsemblPlants:CDY24941 | EnsemblPlantsGene:GSBRNA2T00028736001 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR43944 | PANTHER:PTHR43944:SF6 | ProteinID:CDY24941 | ProteinID:CDY24941.1 | SEG:seg | SUPFAM:SSF52047 |
| UniParc:UPI0004EE84D6 | UniProt:A0A078GHU3 | MapMan:11.7.2.1.1 | : | : | : |
Description
BnaC03g22310DBnaC03g22310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHU3]
Coordinates
chrLK032166:+:348954..351692
Molecular Weight (calculated)
67182.6 Da
IEP (calculated)
5.808
GRAVY (calculated)
-0.194
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPDIKKCR LSSVTVDDVI EQVMPYITDP KDRDSASLVC RRWFEIDSET REHVTMALCY TSTPDRLSRR FPNLRSIKLK GKPRAAMFNL IPENWGGFVT
101: PWVNEVASSL PRLKSVHFRR MIVSDLDLDV LAKARLDELE ALKLDKCSGF STDGLFSIVK HCRKMKTLLM EESSFVEKDG NWLHELALHN TSLEVLNFYM
201: TEFAKINAKD LESIARNCRS LVSVKIGDFE MLELVGFFKA ATNLEEFCGG SFNEEIGRPE KYMNLTFPPK LCCLGLSYMG PNEMPILFPF AAQIRKLDLI
301: YALLATEDHC TLIQKCPNLE VLETRNVIGD RGLEVLGQCC KKLKRLRIER GEDEQGMEDE EGLVSQRGLV ALAQGCQELE YMAVYVSDIT NESLESIGTY
401: LKNLCDFRLV LLDQEERITD LPLDNGVRSL LIGCKKLRRF AFYLRQGGLT DVGLSYIGQY SPNVRWMLLG YVGESDEGLM EFSRGCPKLQ KLEMRGCCFS
501: ERAIAAAVLK IPSLRYLWVQ GYRASTTGQD LRLMSRPYWN IELIPARKVP EVNQLGEVRE MEHPAHILAY YSLAGERTDC PPTVKVLREA
101: PWVNEVASSL PRLKSVHFRR MIVSDLDLDV LAKARLDELE ALKLDKCSGF STDGLFSIVK HCRKMKTLLM EESSFVEKDG NWLHELALHN TSLEVLNFYM
201: TEFAKINAKD LESIARNCRS LVSVKIGDFE MLELVGFFKA ATNLEEFCGG SFNEEIGRPE KYMNLTFPPK LCCLGLSYMG PNEMPILFPF AAQIRKLDLI
301: YALLATEDHC TLIQKCPNLE VLETRNVIGD RGLEVLGQCC KKLKRLRIER GEDEQGMEDE EGLVSQRGLV ALAQGCQELE YMAVYVSDIT NESLESIGTY
401: LKNLCDFRLV LLDQEERITD LPLDNGVRSL LIGCKKLRRF AFYLRQGGLT DVGLSYIGQY SPNVRWMLLG YVGESDEGLM EFSRGCPKLQ KLEMRGCCFS
501: ERAIAAAVLK IPSLRYLWVQ GYRASTTGQD LRLMSRPYWN IELIPARKVP EVNQLGEVRE MEHPAHILAY YSLAGERTDC PPTVKVLREA
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Arabidopsis Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.