Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX74819
CDX93223
CDX93225
CDY07040
CDY07041
CDY20501
CDY24941
CDY60996

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G08590.1 CDX74819 AT2G39940.1 14749489
AT5G08590.1 CDX93223 AT2G39940.1 14749489
AT5G08590.1 CDX93225 AT2G39940.1 14749489
AT5G08590.1 CDY07040 AT2G39940.1 14749489
AT5G08590.1 CDY07041 AT2G39940.1 14749489
AT5G08590.1 CDY20501 AT2G39940.1 14749489
AT5G08590.1 CDY24941 AT2G39940.1 14749489
AT5G08590.1 CDY60996 AT2G39940.1 14749489
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69936 Canola cytosol 95.49 98.09
CDX78346 Canola cytosol 92.31 94.05
CDX81116 Canola cytosol 92.31 94.05
AT5G08590.1 Thale cress cytosol 87.53 93.48
CDX84430 Canola cytosol 83.82 89.77
GSMUA_Achr11P... Banana cytosol 15.65 89.39
CDY41527 Canola cytosol 84.35 89.08
KRH59681 Soybean endoplasmic reticulum 76.13 81.77
KRH41015 Soybean endoplasmic reticulum 76.13 81.77
KRH54011 Soybean cytosol 73.47 80.06
KRH63934 Soybean endoplasmic reticulum 74.01 79.94
VIT_07s0031g03210.t01 Wine grape cytosol 75.07 79.72
Solyc05g056550.2.1 Tomato cytosol 74.27 78.65
PGSC0003DMT400060263 Potato cytosol 74.54 78.49
CDY46190 Canola cytosol 72.94 78.12
CDY34860 Canola cytosol 72.68 76.75
Os04t0432000-02 Rice cytosol 72.68 76.32
CDY20973 Canola cytosol 71.62 76.27
CDY34668 Canola cytosol 72.94 76.18
TraesCS2D01G302500.1 Wheat cytosol, golgi 71.88 75.91
TraesCS2A01G303900.1 Wheat cytosol 71.88 75.91
TraesCS2B01G320500.1 Wheat cytosol 71.88 75.91
HORVU2Hr1G075470.2 Barley cytosol 71.62 75.63
CDX97923 Canola cytosol 72.41 75.41
EES06943 Sorghum cytosol 72.15 74.73
CDY72554 Canola cytosol 57.03 74.39
Os02t0551100-01 Rice plasma membrane 70.82 73.15
GSMUA_Achr11P... Banana cytosol 54.11 73.12
KXG26327 Sorghum cytosol 71.09 71.09
CDX88435 Canola cytosol 53.32 70.53
CDX89537 Canola cytosol 62.6 70.24
CDY38921 Canola cytosol 62.86 69.5
CDY68287 Canola cytosol 20.42 69.37
CDX87456 Canola cytosol 56.5 66.77
CDX79254 Canola cytosol 60.21 66.37
CDY19332 Canola cytosol 72.68 66.02
CDY20594 Canola cytosol 53.58 65.8
CDX69016 Canola cytosol 62.6 65.19
CDX75391 Canola cytosol 61.8 64.54
CDX69364 Canola cytosol 58.62 63.69
CDY12785 Canola cytosol 60.74 63.26
CDY01456 Canola cytosol 60.74 63.26
CDY02082 Canola cytosol 57.82 60.39
CDY23007 Canola cytosol 57.82 60.39
CDX97922 Canola cytosol 37.67 57.96
CDY31613 Canola cytosol 20.95 56.83
CDY68254 Canola cytosol 28.38 53.23
CDY52825 Canola plasma membrane 21.49 48.5
CDY03768 Canola cytosol 73.47 47.03
Zm00001d042188_P001 Maize plastid 23.08 43.5
CDX68023 Canola cytosol 60.21 36.26
KRH30137 Soybean extracellular, plasma membrane 11.41 35.83
Zm00001d047445_P001 Maize plastid 16.45 29.25
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.5.2Gene3D:3.30.200.20GO:A0A078GA33UniProt:A0A078GA33EnsemblPlants:CDY21553
ProteinID:CDY21553ProteinID:CDY21553.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00016006001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24343PANTHER:PTHR24343:SF161InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEBF64SEG:seg:
Description
BnaC09g47390DBnaC09g47390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA33]
Coordinates
chrLK032122:+:210874..213459
Molecular Weight (calculated)
43451.6 Da
IEP (calculated)
5.768
GRAVY (calculated)
-0.500
Length
377 amino acids
Sequence
(BLAST)
001: MDKYEVVKDL GTGNFGVARL LRHKETKELV AMKYIERGRK IDENVAREII NHRSLKHPNI IRFKEASFSF FFFNWDFLVI LTPTHLAIVM EYASGGELFE
101: RICTAGRFSE AEARYFFQQL ICGVDYCHSL QICHRDLKLE NTLLDGSPAP LLKICDFGYS KSSILHSRPK STVGTPAYIA PEVLSRREYD GKHADVWSCG
201: VTLYVMLVGA YPFEDPNDPK NFRKTIQRIM AIQYKIPDYV HISQECKHLL SRIFVTNPAK RITLKEIKNH PWYLKNLPKE LLESAQAVYY KRDNTSYSLQ
301: SVEDIMKIVG EARNPASSSS VSKSLGSGVE EEEDVEAEVE VEEEEEEEEE EEDEYEKHVK EAHSSIQEPH EALKEKK
Best Arabidopsis Sequence Match ( AT1G10940.1 )
(BLAST)
001: MDKYELVKDI GAGNFGVARL MKVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFR KTIQKIMAVQ YKIPDYVHIS QDCKNLLSRI FVANSLKRIT IAEIKKHSWF LKNLPRELTE TAQAAYFKKE NPTFSLQTVE EIMKIVADAK
301: TPPPVSRSIG GFGWGGNGDA DGKEEDAEDV EEEEEEVEEE EDDEDEYDKT VKEVHASGEV RIS
Arabidopsis Description
ASK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7B6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.