CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87456	Canola	cytosol	96.49	86.21
CDX79254	Canola	cytosol	90.18	75.15
AT1G78290.2	Thale cress	cytosol	88.77	73.76
CDY68287	Canola	cytosol	28.07	72.07
CDY72554	Canola	cytosol	69.82	68.86
VIT_18s0001g06310.t01	Wine grape	cytosol	80.7	68.66
KRH72382	Soybean	cytosol	80.7	68.05
KRH16769	Soybean	cytosol	80.35	67.75
EER92182	Sorghum	cytosol	81.4	67.44
Os07t0622000-01	Rice	plasma membrane	80.0	67.26
TraesCS2D01G170700.1	Wheat	cytosol	80.0	66.86
TraesCS2B01G521800.1	Wheat	cytosol	80.35	66.76
Os03t0390200-01	Rice	cytosol	80.0	66.67
TraesCS2D01G493700.1	Wheat	cytosol	79.3	66.08
TraesCS2A01G493800.1	Wheat	cytosol	79.3	66.08
EER97562	Sorghum	cytosol	78.6	66.08
GSMUA_Achr3P01710_001	Banana	cytosol	77.54	65.19
PGSC0003DMT400079214	Potato	cytosol	76.14	64.78
Solyc04g074500.2.1	Tomato	cytosol	76.14	64.78
Zm00001d047220_P003	Maize	cytosol	80.35	64.69
TraesCS2A01G163800.1	Wheat	cytosol	80.0	64.59
TraesCS2B01G189600.1	Wheat	cytosol	80.0	64.59
PGSC0003DMT400045810	Potato	cytosol	76.14	64.58
Zm00001d022179_P001	Maize	cytosol	77.89	64.35
Bra035026.1-P	Field mustard	cytosol	36.84	62.13
HORVU2Hr1G110230.16	Barley	cytosol	74.74	61.92
CDX69364	Canola	cytosol	73.68	60.52
CDY46190	Canola	cytosol	73.33	59.38
CDX69016	Canola	cytosol	74.74	58.84
CDX75391	Canola	cytosol	74.04	58.45
CDY34860	Canola	cytosol	72.28	57.7
CDY01456	Canola	cytosol	72.63	57.18
CDY12785	Canola	cytosol	72.63	57.18
CDY20973	Canola	cytosol	70.88	57.06
CDX97923	Canola	cytosol	71.93	56.63
CDY34668	Canola	cytosol	71.58	56.51
CDX84430	Canola	cytosol	69.47	56.25
CDY41527	Canola	cytosol	69.82	55.74
CDX97922	Canola	cytosol	47.72	55.51
CDY23007	Canola	cytosol	69.82	55.12
CDY02082	Canola	cytosol	69.82	55.12
CDX69936	Canola	cytosol	70.53	54.77
CDX89537	Canola	cytosol	63.51	53.87
CDX81116	Canola	cytosol	69.82	53.78
CDX78346	Canola	cytosol	69.82	53.78
CDY38921	Canola	cytosol	63.86	53.37
CDY21553	Canola	cytosol	70.53	53.32
CDY19332	Canola	cytosol	71.58	49.16
HORVU2Hr1G029900.2	Barley	cytosol	79.65	49.13
CDY20594	Canola	cytosol	52.28	48.53
CDY68254	Canola	cytosol	34.04	48.26
CDY52825	Canola	plasma membrane	28.07	47.9
GSMUA_Achr1P21480_001	Banana	cytosol	80.7	45.73
CDY31613	Canola	cytosol	22.11	45.32
CDX68023	Canola	cytosol	90.18	41.05
CDY03768	Canola	cytosol	72.98	35.31

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	GO:A0A078DGS3	EnsemblPlants:CDX88435	ProteinID:CDX88435
ProteinID:CDX88435.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00147977001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF309
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE0886	SEG:seg

Description

BnaC06g38790D

Coordinates

chrLK031855:-:1007966..1009424

Molecular Weight (calculated)

32314.5 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.278

Length

285 amino acids

Sequence
(BLAST)

001: MERYDIVKDI RSGNFGVAKL VRDKFSKELF AGKFIERGQK IDEHVQREIM NHRSLNHPNI IRFKEVLLTA THLAIVMEYA AGGELFERIG SSGRFSEDEA
101: RFFFQQLISG ASYCHSLQIC HRDLKLENTL LDGSAAPRVK ICDFGYSKSG VLHSQPKTTV GTPAYIAPEV LSTREYDGKV ADVWSCGVTL YVMLVGAYPF
201: EDPCDPKDFR KTIGRILRAH YSVPDYVSDE CKHLLSRIFI ANPEKRITME EIKNHYYSGG AVGSSMDLDD LDIDYDYIDT GDFVL

Best Arabidopsis Sequence Match ( AT1G78290.2 )
(BLAST)

001: MERYEIVKDI GSGNFGVAKL VRDKFSKELF AVKFIERGQK IDEHVQREIM NHRSLIHPNI IRFKEVLLTA THLALVMEYA AGGELFGRIC SAGRFSEDEA
101: RFFFQQLISG VNYCHSLQIC HRDLKLENTL LDGSEAPRVK ICDFGYSKSG VLHSQPKTTV GTPAYIAPEV LSTKEYDGKI ADVWSCGVTL YVMLVGAYPF
201: EDPSDPKDFR KTIGRILKAQ YAIPDYVRVS DECRHLLSRI FVANPEKRIT IEEIKNHSWF LKNLPVEMYE GSLMMNGPST QTVEEIVWII EEARKPITVA
301: TGLAGAGGSG GSSNGAIGSS SMDLDDLDTD FDDIDTADLL SPL

Arabidopsis Description

SRK2CSRK2C [Source:UniProtKB/TrEMBL;Acc:A0A178W6S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.