CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038652.1-P	Field mustard	cytosol	99.43	98.04
CDY41527	Canola	cytosol	99.43	98.04
AT5G63650.1	Thale cress	cytosol	94.6	92.5
GSMUA_Achr11P...	Banana	cytosol	16.76	89.39
CDX69936	Canola	cytosol	88.92	85.29
CDY21553	Canola	cytosol	89.77	83.82
KRH41015	Soybean	endoplasmic reticulum	83.52	83.76
CDX78346	Canola	cytosol	87.78	83.51
KRH59681	Soybean	endoplasmic reticulum	83.24	83.48
CDX81116	Canola	cytosol	86.93	82.7
KRH54011	Soybean	cytosol	80.4	81.79
KRH63934	Soybean	endoplasmic reticulum	80.68	81.38
VIT_07s0031g03210.t01	Wine grape	cytosol	80.97	80.28
CDY46190	Canola	cytosol	78.69	78.69
Solyc05g056550.2.1	Tomato	cytosol	79.26	78.37
PGSC0003DMT400060263	Potato	cytosol	79.26	77.93
CDY20973	Canola	cytosol	78.12	77.68
CDY34860	Canola	cytosol	78.69	77.59
TraesCS2D01G302500.1	Wheat	cytosol, golgi	78.41	77.31
TraesCS2A01G303900.1	Wheat	cytosol	78.41	77.31
TraesCS2B01G320500.1	Wheat	cytosol	78.41	77.31
Os04t0432000-02	Rice	cytosol	78.69	77.16
HORVU2Hr1G075470.2	Barley	cytosol	78.12	77.03
CDY34668	Canola	cytosol	78.98	77.01
CDX97923	Canola	cytosol	78.69	76.52
GSMUA_Achr11P...	Banana	cytosol	59.38	74.91
CDY72554	Canola	cytosol	61.36	74.74
EES06943	Sorghum	cytosol	77.27	74.73
Os02t0551100-01	Rice	plasma membrane	76.7	73.97
KXG26327	Sorghum	cytosol	77.27	72.15
CDX89537	Canola	cytosol	67.33	70.54
CDY38921	Canola	cytosol	67.61	69.79
CDX88435	Canola	cytosol	56.25	69.47
CDY68287	Canola	cytosol	21.59	68.47
CDY20594	Canola	cytosol	58.52	67.1
CDY19332	Canola	cytosol	78.69	66.75
CDX87456	Canola	cytosol	59.94	66.14
CDX79254	Canola	cytosol	63.35	65.2
CDX75391	Canola	cytosol	66.76	65.1
CDX69016	Canola	cytosol	66.76	64.92
CDX69364	Canola	cytosol	63.64	64.55
CDY12785	Canola	cytosol	65.06	63.26
CDY01456	Canola	cytosol	65.06	63.26
CDY23007	Canola	cytosol	61.93	60.39
CDY02082	Canola	cytosol	61.93	60.39
CDX97922	Canola	cytosol	40.62	58.37
CDY31613	Canola	cytosol	23.01	58.27
CDY68254	Canola	cytosol	31.82	55.72
CDY52825	Canola	plasma membrane	23.01	48.5
CDY03768	Canola	cytosol	78.41	46.86
Zm00001d042188_P001	Maize	plastid	25.85	45.5
KRH30137	Soybean	extracellular, plasma membrane	12.78	37.5
CDX68023	Canola	cytosol	63.35	35.62
Zm00001d047445_P001	Maize	plastid	17.9	29.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	GO:A0A078D5L5	EnsemblPlants:CDX84430	ProteinID:CDX84430
ProteinID:CDX84430.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00141636001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24343	PANTHER:PTHR24343:SF161	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE3B5E	SEG:seg	:	:	:

Description

BnaC03g50700D

Coordinates

chrLK031837:-:1139908..1141647

Molecular Weight (calculated)

40393.8 Da

IEP (calculated)

5.496

GRAVY (calculated)

-0.602

Length

352 amino acids

Sequence
(BLAST)

001: MDKYEVVKDL GAGNFGVARL LRHKETKDLV AMKYIERGRK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIVMEYA SGGELFERIC NAGRFSEAEA
101: RYFFQQLICG VDYCHSLQIC HRDLKLENTL LDGSPAPLLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKN ADVWSCGVTL YVMLVGGYPF
201: EDPDDPRNFR KTIQRIMAVQ YKIPDYVHIS QECKHLLSRI FVTNPAKRIT LKEIKKHPWF LKNLPKELTD SAQAAYYKRD NPSFSLQSVE DIMKIVGEAR
301: NPAPSSSAVK GFDEDDEDEV EEEEEEEDEE EEEDEYETHV KEAHKSQESS KA

Best Arabidopsis Sequence Match ( AT5G63650.1 )
(BLAST)

001: MDKYEVVKDL GAGNFGVARL LRHKETKELV AMKYIERGRK IDENVAREII NHRSLRHPNI IRFKEVILTP THLAIVMEYA SGGELFERIC NAGRFSEAEA
101: RYFFQQLICG VDYCHSLQIC HRDLKLENTL LDGSPAPLLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKH ADVWSCGVTL YVMLVGGYPF
201: EDPDDPRNFR KTIQRIMAVQ YKIPDYVHIS QECRHLLSRI FVTNSAKRIT LKEIKKHPWY LKNLPKELTE PAQAAYYKRE TPSFSLQSVE DIMKIVGEAR
301: NPAPSSNAVK GFDDDEEDVE DEVEEEEEEE EEEEEEEEEE EDEYEKHVKE AHSCQEPPKA

Arabidopsis Description

SRK2HSerine/threonine-protein kinase SRK2H [Source:UniProtKB/Swiss-Prot;Acc:Q9FFP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.