CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54011	Soybean	cytosol	98.57	99.42
KRH59681	Soybean	endoplasmic reticulum	91.69	91.17
KRH41015	Soybean	endoplasmic reticulum	91.69	91.17
GSMUA_Achr11P...	Banana	cytosol	16.05	84.85
VIT_07s0031g03210.t01	Wine grape	cytosol	85.1	83.66
KRH44077	Soybean	endoplasmic reticulum, nucleus	83.95	83.24
KRH26363	Soybean	nucleus	84.81	82.45
CDX84430	Canola	cytosol	81.38	80.68
Solyc05g056550.2.1	Tomato	cytosol	81.95	80.34
Os04t0432000-02	Rice	cytosol	82.52	80.22
PGSC0003DMT400060263	Potato	cytosol	82.23	80.17
Bra038652.1-P	Field mustard	cytosol	81.95	80.11
CDY41527	Canola	cytosol	81.95	80.11
TraesCS2D01G302500.1	Wheat	cytosol, golgi	79.94	78.15
TraesCS2B01G320500.1	Wheat	cytosol	79.94	78.15
TraesCS2A01G303900.1	Wheat	cytosol	79.94	78.15
HORVU2Hr1G075470.2	Barley	cytosol	79.66	77.87
EES06943	Sorghum	cytosol	81.09	77.75
GSMUA_Achr11P...	Banana	cytosol	61.89	77.42
Os02t0551100-01	Rice	plasma membrane	79.66	76.16
CDX69936	Canola	cytosol	79.66	75.75
Bra009354.1-P	Field mustard	cytosol	79.66	75.14
CDY21553	Canola	cytosol	79.94	74.01
CDX78346	Canola	cytosol	78.22	73.78
KXG26327	Sorghum	cytosol	79.37	73.47
Bra006010.1-P	Field mustard	cytosol	78.22	73.39
CDX81116	Canola	cytosol	77.65	73.24
KRH72382	Soybean	cytosol	66.76	68.93
KRH57532	Soybean	cytosol, endoplasmic reticulum, nucleus	66.19	68.75
KRH43149	Soybean	cytosol	67.91	68.7
KRH33219	Soybean	cytosol	24.93	68.5
KRH04240	Soybean	cytosol	65.62	68.15
KRH28204	Soybean	cytosol	65.9	67.85
KRH16769	Soybean	cytosol	65.62	67.75
KRH77286	Soybean	cytosol	65.33	67.26
AT4G11373.1	Thale cress	cytosol	21.78	67.26
KRH71186	Soybean	endoplasmic reticulum	67.05	66.1
KRG89230	Soybean	cytosol	68.77	65.93
KRH49772	Soybean	cytosol	68.77	64.86
KRH59295	Soybean	cytosol, endoplasmic reticulum	58.45	64.76
KRH50231	Soybean	cytosol	67.91	64.58
KRH43042	Soybean	cytosol	48.42	64.5
KRH28215	Soybean	cytosol, plastid, vacuole	22.35	64.46
KRH76942	Soybean	cytosol	55.3	63.91
KRH04679	Soybean	nucleus, plastid	65.62	63.61
KRH57751	Soybean	nucleus	65.04	63.06
KRH28516	Soybean	cytosol	63.61	61.84
KRH76943	Soybean	cytosol, extracellular, plasma membrane	8.31	50.88
KRH08581	Soybean	mitochondrion	16.62	50.88
KRH30137	Soybean	extracellular, plasma membrane	13.18	38.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	EMBL:ACUP02002730	EnsemblPlantsGene:GLYMA_04G205400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1JXV4
InterPro:IPR000719	EnsemblPlants:KRH63934	ProteinID:KRH63934	ProteinID:KRH63934.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF161
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023BF935
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:47809152..47812800

Molecular Weight (calculated)

40351.2 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.497

Length

349 amino acids

Sequence
(BLAST)

001: MDKYEAVKDL GAGNFGVARL MRNKVTKELV AMKYIERGPK IDENVAREIM NHRSLRHPNI IRYKEVVLTP THLAIVMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VHFCHTMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKL ADVWSCAVTL YVMLVGAYPF
201: EDQDDPRNFR KTIQRIMAVQ YKIPDYVHIS QDCRHLLSRI FVANPLRRIT IKEIKNHPWF LRNLPRELTE SAQAIYYQRD SPNFHLQSVD EIMKIVGEAR
301: NPPPVSRPVK GFGWEGEEDL DEEVEEEEDE DEYDKRVKEV HASGEFQIS

Best Arabidopsis Sequence Match ( AT1G10940.1 )
(BLAST)

001: MDKYELVKDI GAGNFGVARL MKVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFR KTIQKIMAVQ YKIPDYVHIS QDCKNLLSRI FVANSLKRIT IAEIKKHSWF LKNLPRELTE TAQAAYFKKE NPTFSLQTVE EIMKIVADAK
301: TPPPVSRSIG GFGWGGNGDA DGKEEDAEDV EEEEEEVEEE EDDEDEYDKT VKEVHASGEV RIS

Arabidopsis Description

ASK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.