CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161
endoplasmic reticulum: 27224218

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04240	Soybean	cytosol	98.51	98.51
VIT_02s0236g00130.t01	Wine grape	cytosol	81.85	80.88
Os10t0564500-01	Rice	cytosol, plastid	78.87	79.34
GSMUA_Achr5P12610_001	Banana	cytosol	79.76	79.06
KRH77286	Soybean	cytosol	79.17	78.47
KXG38898	Sorghum	cytosol	77.38	78.08
Solyc08g077780.2.1	Tomato	cytosol	78.57	77.88
KRH28204	Soybean	cytosol	78.57	77.88
Zm00001d029975_P003	Maize	cytosol, extracellular	77.08	77.78
PGSC0003DMT400067426	Potato	cytosol	78.27	77.58
HORVU1Hr1G055340.9	Barley	cytosol	77.98	76.83
TraesCS1D01G218200.1	Wheat	cytosol	77.98	76.61
TraesCS1A01G215900.1	Wheat	cytosol	77.98	76.61
TraesCS1B01G229400.1	Wheat	cytosol	77.68	76.32
KRH72382	Soybean	cytosol	71.13	70.71
KRH43149	Soybean	cytosol	72.32	70.43
KRH16769	Soybean	cytosol	70.54	70.12
KRH33219	Soybean	cytosol	26.49	70.08
KRH71186	Soybean	endoplasmic reticulum	72.02	68.36
KRH76942	Soybean	cytosol	61.31	68.21
KRH59295	Soybean	cytosol, endoplasmic reticulum	63.1	67.3
KRH44077	Soybean	endoplasmic reticulum, nucleus	70.24	67.05
KRH59681	Soybean	endoplasmic reticulum	69.94	66.95
KRH41015	Soybean	endoplasmic reticulum	69.94	66.95
KRH54011	Soybean	cytosol	68.75	66.76
KRH50231	Soybean	cytosol	72.32	66.21
KRH63934	Soybean	endoplasmic reticulum	68.75	66.19
KRG89230	Soybean	cytosol	71.13	65.66
KRH26363	Soybean	nucleus	69.94	65.46
KRH49772	Soybean	cytosol	71.43	64.86
KRH28516	Soybean	cytosol	69.05	64.62
KRH28215	Soybean	cytosol, plastid, vacuole	22.92	63.64
KRH04679	Soybean	nucleus, plastid	67.26	62.78
KRH57751	Soybean	nucleus	66.67	62.22
KRH43042	Soybean	cytosol	46.13	59.16
KRH08581	Soybean	mitochondrion	16.37	48.25
KRH76943	Soybean	cytosol, extracellular, plasma membrane	8.04	47.37
KRH30137	Soybean	extracellular, plasma membrane	13.69	38.33

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100817713	MapMan:18.4.5.2	Gene3D:3.30.200.20	EMBL:ACUP02002854	EMBL:ACUP02002855
EnsemblPlantsGene:GLYMA_05G066700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
UniProt:I1K0W9	InterPro:IPR000719	ProteinID:KRH57530.1	ProteinID:KRH57531.1	EnsemblPlants:KRH57532	ProteinID:KRH57532
ProteinID:KRH57532.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF214	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A0C4	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:6682751..6687819

Molecular Weight (calculated)

38126.6 Da

IEP (calculated)

5.546

GRAVY (calculated)

-0.447

Length

336 amino acids

Sequence
(BLAST)

001: MEERYEPLKE LGAGNFGVAR LAKDKKTGEL VAVKYIERGK KIDENVQREI INHRSLRHPN IIRFKEVLLT PTHLAIVLEY ASGGELFERI CTAGRFSEDE
101: ARYFFQQLIS GVSYCHSMEI CHRDLKLENT LLDGNPSPRL KICDFGYSKS ALLHSQPKST VGTPAYIAPE VLSRKEYDGK ISDVWSCGVT LYVMLVGAYP
201: FEDPEDPRNF RKTIGRIIGV QYSIPDYVRV SSDCRNLLSR IFVADPAKRI TIPEIKQYPW FLKNMPKEII EAERKGFEET TKDQPSQKVE EIMRIIQEAR
301: IPGQGSKAGE VGQVGTGSLD IEDDEEIDVS GDYEQV

Best Arabidopsis Sequence Match ( AT1G10940.1 )
(BLAST)

001: MDKYELVKDI GAGNFGVARL MKVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFR KTIQKIMAVQ YKIPDYVHIS QDCKNLLSRI FVANSLKRIT IAEIKKHSWF LKNLPRELTE TAQAAYFKKE NPTFSLQTVE EIMKIVADAK
301: TPPPVSRSIG GFGWGGNGDA DGKEEDAEDV EEEEEEVEEE EDDEDEYDKT VKEVHASGEV RIS

Arabidopsis Description

ASK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.