Factsheet for PGSC0003DMT400067426

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077780.2.1	Tomato	cytosol	97.94	97.94
VIT_02s0236g00130.t01	Wine grape	cytosol	81.71	81.47
KRH57532	Soybean	cytosol, endoplasmic reticulum, nucleus	77.58	78.27
KRH04240	Soybean	cytosol	77.29	77.98
GSMUA_Achr5P12610_001	Banana	cytosol	76.99	76.99
Zm00001d029975_P003	Maize	cytosol, extracellular	74.04	75.38
Os10t0564500-01	Rice	cytosol, plastid	73.45	74.55
KXG38898	Sorghum	cytosol	73.16	74.47
TraesCS1D01G218200.1	Wheat	cytosol	73.75	73.1
TraesCS1B01G229400.1	Wheat	cytosol	73.75	73.1
TraesCS1A01G215900.1	Wheat	cytosol	73.75	73.1
HORVU1Hr1G055340.9	Barley	cytosol	73.45	73.02
PGSC0003DMT400060762	Potato	cytosol, plastid	72.86	71.8
PGSC0003DMT400045810	Potato	cytosol	69.32	69.94
PGSC0003DMT400079214	Potato	cytosol	69.03	69.85
PGSC0003DMT400066617	Potato	cytosol, nucleus	71.98	67.4
PGSC0003DMT400061170	Potato	cytosol	71.09	66.94
PGSC0003DMT400060263	Potato	cytosol	69.03	65.36
PGSC0003DMT400041670	Potato	cytosol	55.75	63.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	ProteinID:AFR68939	ProteinID:AFR68939.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EMBL:JX280912
InterPro:Kinase-like_dom_sf	UniProt:M1CH82	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400026211	PGSC:PGSC0003DMG400026211	EnsemblPlants:PGSC0003DMT400067426
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF214
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295D83D
SEG:seg	:	:	:	:	:

Description

PK11-C1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026211]

Coordinates

chr8:+:50910219..50914246

Molecular Weight (calculated)

38499.2 Da

IEP (calculated)

6.198

GRAVY (calculated)

-0.416

Length

339 amino acids

Sequence
(BLAST)

001: MEEKYELLKE LGAGNFGVAR LVKDKKTKEL LAVKYIERGK KIDENVQREI INHRSLRHPN IVRFKEVLVT PSHLAIVMEY AAGGELFGRI CSAGRFSEDE
101: ARFFFQQLIS GVSYCHTMEI CHRDLKLENT LLDGSPSPRL KICDFGYSKS GLLHSQPKST VGTPAYIAPE VLSRKEYDGK IADVWSCGVT LYVMLVGAYP
201: FEDPEDPKNF RKTIGRIMSA QHSIPDYVRI TPDCKNLLSR IFVANPSKRI TIPEIKKHPW FLKNLPKELM DVEHTKFEEA SEQLQQSVEE IMKMIQEAKI
301: PGVVSKSEGK DHAGTTEQDD LEEDLESEID SSNDFAVYV

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.