Factsheet for PGSC0003DMT400060762

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 28506210

gfp PMID: 28506210 doi

J Bai, J Mao, H Yang, A Khan, A Fan, S Liu, J Zhang, D Wang, H Gao, J Zhang

College of Agronomy, Gansu Agricultural University, Lanzhou, 730070, Gansu, People's Republic of China., College of Agronomy, Gansu Agricultural University, Lanzhou, 730070, Gansu, People's Republic of China. baijp@gsau.edu.cn., College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, Gansu, People's Republic of China., Gansu Key Lab of Crop Improvement & Germplasm Enhancement, Gansu Provincial Key Lab of Aridland Crop Science, Lanzhou, 730070, Gansu, People's Republic of China., Gansu Key Lab of Crop Improvement & Germplasm Enhancement, Gansu Provincial Key Lab of Aridland Crop Science, Lanzhou, 730070, Gansu, People's Republic of China. baijp@gsau.edu.cn., Gansu Key Lab of Crop Improvement & Germplasm Enhancement, Gansu Provincial Key Lab of Aridland Crop Science, Lanzhou, 730070, Gansu, People's Republic of China. jlzhang@lzu.edu.cn., International Potato Center (CIP), Avenida La Molina 1895, La Molina Apartado, 1558, Lima, Peru., State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, Gansu, People's Republic of China., State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, Gansu, People's Republic of China. jlzhang@lzu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g012160.2.1	Tomato	cytosol	99.42	99.13
VIT_07s0191g00070.t01	Wine grape	cytosol	81.4	82.84
VIT_00s0710g00020.t01	Wine grape	cytosol	81.4	82.84
KRH43149	Soybean	cytosol	81.69	81.45
KRH59295	Soybean	cytosol, endoplasmic reticulum	72.09	78.73
CDY68287	Canola	cytosol	25.29	78.38
PGSC0003DMT400079214	Potato	cytosol	72.09	74.03
PGSC0003DMT400045810	Potato	cytosol	71.51	73.21
PGSC0003DMT400067426	Potato	cytosol	71.8	72.86
Bra011815.1-P	Field mustard	cytosol	72.09	71.47
CDX69364	Canola	cytosol	71.8	71.18
PGSC0003DMT400041670	Potato	cytosol	61.92	71.0
AT4G40010.1	Thale cress	cytosol	72.09	70.86
PGSC0003DMT400066617	Potato	cytosol, nucleus	69.77	66.3
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	19.77	65.38
CDY68254	Canola	cytosol	37.5	64.18
PGSC0003DMT400061170	Potato	cytosol	66.57	63.61
PGSC0003DMT400060263	Potato	cytosol	65.41	62.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	ProteinID:AFR68942	ProteinID:AFR68942.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EMBL:JX280915	InterPro:Kinase-like_dom_sf
UniProt:M1C6E4	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400023636	PGSC:PGSC0003DMG400023636	EnsemblPlants:PGSC0003DMT400060762	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF207	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002950F01	SEG:seg

Description

Serine/threonine-protein kinase SAPK2 [Source:PGSC_GENE;Acc:PGSC0003DMG400023636]

Coordinates

chr4:+:8038456..8042383

Molecular Weight (calculated)

39208.7 Da

IEP (calculated)

5.471

GRAVY (calculated)

-0.356

Length

344 amino acids

Sequence
(BLAST)

001: MERYEIQKDI GSGNFGVAKL VKDKWSGELF AVKYIERGKK IDEHVQREIM NHRSLRHPNI IRFKEVFLTP AHLAIVMEYA SGGELFERIC NAGRFSEDEA
101: RFFFQQLISG VSYCHSMQIC HRDLKLENTL LDGSSTQCLK ICDFGYSKSA ALHSQPKSTV GTPAYIAPEV LSRKEYDGKI ADVWSCGVTL YVMLVGAYPF
201: EDPDDPRNFK KTITRILSVQ YSIPYYVRVS KECNHLLSRI FVADPEKRIT IEEIKKHPWF LKNLPKEFMK GEEASLVQMN SEEKPLQSIE EALAIIQEAR
301: KPGEGSKASD YFVHSSISMD LDDFDTDADL DDEIDTSGDF VCAL

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.