Factsheet for Solyc04g012160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060762	Potato	cytosol, plastid	99.13	99.42
VIT_07s0191g00070.t01	Wine grape	cytosol	80.87	82.54
VIT_00s0710g00020.t01	Wine grape	cytosol	80.87	82.54
KRH43149	Soybean	cytosol	81.74	81.74
CDY68287	Canola	cytosol	25.51	79.28
KRH59295	Soybean	cytosol, endoplasmic reticulum	71.88	78.73
Solyc11g010130.1.1	Tomato	cytosol	50.43	75.98
Solyc11g010150.1.1	Tomato	cytosol	17.97	74.7
Solyc04g074500.2.1	Tomato	cytosol	71.88	74.03
Solyc08g077780.2.1	Tomato	cytosol	72.46	73.75
Bra011815.1-P	Field mustard	cytosol	72.17	71.76
CDX69364	Canola	cytosol	71.88	71.47
AT4G40010.1	Thale cress	cytosol	71.59	70.57
Solyc02g090390.2.1	Tomato	cytosol	68.12	66.76
Solyc01g108280.2.1	Tomato	cytosol	69.28	66.02
CDY68254	Canola	cytosol	37.39	64.18
Solyc01g103940.2.1	Tomato	plastid	66.09	63.16
Solyc05g056550.2.1	Tomato	cytosol	64.35	62.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	UniProt:A1IKU3	EMBL:AB275884	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24343	PANTHER:PTHR24343:SF207	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc04g012160.2	EnsemblPlants:Solyc04g012160.2.1	UniParc:UPI0000ED112D	SEG:seg	:

Description

SNF1-related kinase [Source:UniProtKB/TrEMBL;Acc:A1IKU3]

Coordinates

chr4:+:4446264..4449928

Molecular Weight (calculated)

39286.8 Da

IEP (calculated)

5.486

GRAVY (calculated)

-0.359

Length

345 amino acids

Sequence
(BLAST)

001: MERYEIQKDI GSGNFGVAKL VKDKWSGELF AVKYIERGKK IDEHVQREIM NHRSLRHPNI IRFKEVFLTP AHLAIVMEYA SGGELFERIC SAGRFSEDEA
101: RFFFQQLISG VSYCHSMQIC HRDLKLENTL LDGSSTQCLK ICDFGYSKSA ALHSQPKSTV GTPAYIAPEV LSRKEYDGKI ADVWSCGVTL YVMLVGAYPF
201: EDPDDPRNFK KTITRILSVQ YSIPYYVRVS KECNHLLSRI FVADPEKRIT IEEIKKHPWF LKNLPKEFMK KGEEASLVQM NSEEKPLQSI EEALAIIQEA
301: RKPGEGSKAS DYFVNSSISM DLDDFDTDAD LDDEIDTSGD FVCAL

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.