Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011815.1-P | Field mustard | cytosol | 97.98 | 97.98 |
| CDY68254 | Canola | cytosol | 55.91 | 96.52 |
| CDY68287 | Canola | cytosol | 30.26 | 94.59 |
| AT4G40010.1 | Thale cress | cytosol | 91.07 | 90.29 |
| VIT_07s0191g00070.t01 | Wine grape | cytosol | 74.06 | 76.04 |
| VIT_00s0710g00020.t01 | Wine grape | cytosol | 73.78 | 75.74 |
| KRH43149 | Soybean | cytosol | 73.49 | 73.91 |
| CDX88435 | Canola | cytosol | 60.52 | 73.68 |
| CDY72554 | Canola | cytosol | 60.81 | 73.01 |
| Solyc04g012160.2.1 | Tomato | cytosol | 71.47 | 71.88 |
| PGSC0003DMT400060762 | Potato | cytosol, plastid | 71.18 | 71.8 |
| CDX87456 | Canola | cytosol | 65.42 | 71.16 |
| KRH59295 | Soybean | cytosol, endoplasmic reticulum | 64.55 | 71.11 |
| CDX79254 | Canola | cytosol | 69.45 | 70.47 |
| CDY46190 | Canola | cytosol | 66.28 | 65.34 |
| CDY31613 | Canola | cytosol | 25.94 | 64.75 |
| CDX69016 | Canola | cytosol | 67.44 | 64.64 |
| CDX75391 | Canola | cytosol | 67.15 | 64.54 |
| CDY12785 | Canola | cytosol | 66.57 | 63.81 |
| CDY01456 | Canola | cytosol | 66.57 | 63.81 |
| CDX84430 | Canola | cytosol | 64.55 | 63.64 |
| CDY34860 | Canola | cytosol | 64.55 | 62.75 |
| CDY41527 | Canola | cytosol | 64.55 | 62.75 |
| Solyc11g010150.1.1 | Tomato | cytosol | 14.99 | 62.65 |
| PGSC0003DMT400041670 | Potato | cytosol | 53.89 | 62.33 |
| CDY34668 | Canola | cytosol | 64.27 | 61.77 |
| CDY20973 | Canola | cytosol | 62.82 | 61.58 |
| CDX97923 | Canola | cytosol | 63.98 | 61.33 |
| CDY23007 | Canola | cytosol | 63.4 | 60.94 |
| CDY02082 | Canola | cytosol | 63.4 | 60.94 |
| CDX89537 | Canola | cytosol | 58.5 | 60.42 |
| CDX69936 | Canola | cytosol | 63.69 | 60.22 |
| CDY38921 | Canola | cytosol | 59.08 | 60.12 |
| CDX78346 | Canola | cytosol | 62.54 | 58.65 |
| CDY21553 | Canola | cytosol | 63.69 | 58.62 |
| CDX81116 | Canola | cytosol | 62.25 | 58.38 |
| CDY20594 | Canola | cytosol | 48.7 | 55.05 |
| CDX97922 | Canola | cytosol | 38.04 | 53.88 |
| CDY19332 | Canola | cytosol | 63.69 | 53.25 |
| CDY52825 | Canola | plasma membrane | 24.21 | 50.3 |
| CDY03768 | Canola | cytosol | 65.99 | 38.88 |
| CDX68023 | Canola | cytosol | 68.59 | 38.02 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.2 | Gene3D:3.30.200.20 | GO:A0A078BZH9 | EnsemblPlants:CDX69364 | ProteinID:CDX69364 |
| ProteinID:CDX69364.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00131215001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24343 |
| PANTHER:PTHR24343:SF313 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EB9916 | SEG:seg | : | : | : | : |
Description
BnaC01g00890D
Coordinates
chrLK031789:+:4379292..4382360
Molecular Weight (calculated)
39316.5 Da
IEP (calculated)
4.638
GRAVY (calculated)
-0.407
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYDILRDL GSGNFGVAKL VREKANGKFY AVKYIERGLK IDEHVQREII NHRDLKHPNI IRFKEVFVTP THLAIVMEYA AGGELFERIC SAGRFSEDEA
101: RYYFKQLISG VSYCHAMQIC HRDLKLENTL LDGSPSSQLK ICDFGYSKSS VLHSQPKSTV GTPAYVAPEV LSRKEYNGKI ADVWSCGVTL YVMLVGAYPF
201: EDPDDPRNIR KTIQRILNVQ YTIPDYVRIS SECKHLLSRI FVAGPDKRIT VPEIEEHSWF LKNPGPVLAD KNIVEEEEEE ENCGQSVEEI VKIIEEARKD
301: VNGKNDNGGL GLIDGSLIDL DDIDDADIYD EVDDDDEEKN GDFVCAL
101: RYYFKQLISG VSYCHAMQIC HRDLKLENTL LDGSPSSQLK ICDFGYSKSS VLHSQPKSTV GTPAYVAPEV LSRKEYNGKI ADVWSCGVTL YVMLVGAYPF
201: EDPDDPRNIR KTIQRILNVQ YTIPDYVRIS SECKHLLSRI FVAGPDKRIT VPEIEEHSWF LKNPGPVLAD KNIVEEEEEE ENCGQSVEEI VKIIEEARKD
301: VNGKNDNGGL GLIDGSLIDL DDIDDADIYD EVDDDDEEKN GDFVCAL
001: MERYDILRDL GSGNFGVAKL VREKANGEFY AVKYIERGLK IDEHVQREII NHRDLKHPNI IRFKEVFVTP THLAIVMEYA AGGELFERIC NAGRFSEDEG
101: RYYFKQLISG VSYCHAMQIC HRDLKLENTL LDGSPSSHLK ICDFGYSKSS VLHSQPKSTV GTPAYVAPEV LSRKEYNGKI ADVWSCGVTL YVMLVGAYPF
201: EDPEDPRNIR NTIQRILSVH YTIPDYVRIS SECKHLLSRI FVADPDKRIT VPEIEKHPWF LKGPLVVPPE EEKCDNGVEE EEEEEEKCRQ SVEEIVKIIE
301: EARKGVNGTD NNGGLGLIDG SIDLDDIDDA DIYDDVDDDE ERNGDFVCAL
101: RYYFKQLISG VSYCHAMQIC HRDLKLENTL LDGSPSSHLK ICDFGYSKSS VLHSQPKSTV GTPAYVAPEV LSRKEYNGKI ADVWSCGVTL YVMLVGAYPF
201: EDPEDPRNIR NTIQRILSVH YTIPDYVRIS SECKHLLSRI FVADPDKRIT VPEIEKHPWF LKGPLVVPPE EEKCDNGVEE EEEEEEKCRQ SVEEIVKIIE
301: EARKGVNGTD NNGGLGLIDG SIDLDDIDDA DIYDDVDDDE ERNGDFVCAL
Arabidopsis Description
SRK2FSerine/threonine-protein kinase SRK2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SMQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.