CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88435	Canola	cytosol	86.21	96.49
CDX79254	Canola	cytosol	90.91	84.8
AT1G78290.2	Thale cress	cytosol	89.03	82.8
Bra035026.1-P	Field mustard	cytosol	41.38	78.11
CDY68287	Canola	cytosol	26.96	77.48
VIT_18s0001g06310.t01	Wine grape	cytosol	78.06	74.33
Os07t0622000-01	Rice	plasma membrane	77.74	73.16
KRH72382	Soybean	cytosol	77.12	72.78
EER97562	Sorghum	cytosol	77.12	72.57
KRH16769	Soybean	cytosol	76.8	72.49
EER92182	Sorghum	cytosol	78.06	72.38
TraesCS2D01G170700.1	Wheat	cytosol	77.12	72.14
Os03t0390200-01	Rice	cytosol	76.8	71.64
TraesCS2B01G521800.1	Wheat	cytosol	76.8	71.43
CDY72554	Canola	cytosol	64.58	71.28
TraesCS2D01G493700.1	Wheat	cytosol	76.18	71.05
TraesCS2A01G493800.1	Wheat	cytosol	76.18	71.05
GSMUA_Achr3P01710_001	Banana	cytosol	74.92	70.5
Zm00001d022179_P001	Maize	cytosol	75.86	70.14
PGSC0003DMT400079214	Potato	cytosol	73.35	69.85
Solyc04g074500.2.1	Tomato	cytosol	73.35	69.85
TraesCS2A01G163800.1	Wheat	cytosol	77.12	69.69
Zm00001d047220_P003	Maize	cytosol	77.12	69.49
TraesCS2B01G189600.1	Wheat	cytosol	76.8	69.41
PGSC0003DMT400045810	Potato	cytosol	72.41	68.75
HORVU2Hr1G110230.16	Barley	cytosol	72.1	66.86
CDX69364	Canola	cytosol	71.16	65.42
CDY46190	Canola	cytosol	70.22	63.64
CDX69016	Canola	cytosol	71.79	63.26
CDX75391	Canola	cytosol	71.16	62.88
CDY34860	Canola	cytosol	68.65	61.34
CDY01456	Canola	cytosol	68.97	60.77
CDY12785	Canola	cytosol	68.97	60.77
CDY20973	Canola	cytosol	67.08	60.45
CDY34668	Canola	cytosol	68.03	60.11
CDX97923	Canola	cytosol	68.03	59.94
CDX84430	Canola	cytosol	66.14	59.94
CDY41527	Canola	cytosol	66.46	59.38
CDY02082	Canola	cytosol	66.46	58.73
CDY23007	Canola	cytosol	66.46	58.73
CDX69936	Canola	cytosol	66.77	58.04
CDX89537	Canola	cytosol	60.81	57.74
CDY38921	Canola	cytosol	61.13	57.18
CDX78346	Canola	cytosol	66.14	57.03
CDX81116	Canola	cytosol	65.83	56.76
CDX97922	Canola	cytosol	43.57	56.73
CDY21553	Canola	cytosol	66.77	56.5
CDY68254	Canola	cytosol	34.48	54.73
HORVU2Hr1G029900.2	Barley	cytosol	76.8	53.03
CDY20594	Canola	cytosol	50.47	52.44
CDY19332	Canola	cytosol	67.71	52.05
CDY52825	Canola	plasma membrane	25.71	49.1
GSMUA_Achr1P21480_001	Banana	cytosol	76.8	48.71
CDY31613	Canola	cytosol	21.0	48.2
CDX68023	Canola	cytosol	90.91	46.33
CDY03768	Canola	cytosol	69.91	37.86

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	GO:A0A078DDW2	EnsemblPlants:CDX87456	ProteinID:CDX87456
ProteinID:CDX87456.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00146437001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF309	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE0012	SEG:seg	:	:	:	:

Description

BnaA07g34170D

Coordinates

chrLK031850:+:706229..707692

Molecular Weight (calculated)

35752.6 Da

IEP (calculated)

5.812

GRAVY (calculated)

-0.208

Length

319 amino acids

Sequence
(BLAST)

001: MERYDIVKDI GSGNFGVAKL VRDKFSKELF AVKFIERGQK IDEHVQREIM NHRSLNHPNI IRFKEVLLTA THLAIVMEYA AGGELFERIC SSGRFSEDEA
101: RFFFQQLISG VSYCHSLQIC HRDLKLENTL LDGSAAPRVK ICDFGYSKSG VLHSQPKTTV GTPAYIAPEV LSTREYDGKV ADVWSCGVTL YVMLVGAYPF
201: EDPSDPKDFR KTMGRILRAH YSVPDYVSDE CKHLLSRIFI ANPEKRITME EIKNHYWFLK EFAEIVWIIQ EARKPIAGAS GLSGAGGSGG SNSGAVGSSM
301: DLDDLDIDYD DIDTGDFVL

Best Arabidopsis Sequence Match ( AT1G78290.2 )
(BLAST)

001: MERYEIVKDI GSGNFGVAKL VRDKFSKELF AVKFIERGQK IDEHVQREIM NHRSLIHPNI IRFKEVLLTA THLALVMEYA AGGELFGRIC SAGRFSEDEA
101: RFFFQQLISG VNYCHSLQIC HRDLKLENTL LDGSEAPRVK ICDFGYSKSG VLHSQPKTTV GTPAYIAPEV LSTKEYDGKI ADVWSCGVTL YVMLVGAYPF
201: EDPSDPKDFR KTIGRILKAQ YAIPDYVRVS DECRHLLSRI FVANPEKRIT IEEIKNHSWF LKNLPVEMYE GSLMMNGPST QTVEEIVWII EEARKPITVA
301: TGLAGAGGSG GSSNGAIGSS SMDLDDLDTD FDDIDTADLL SPL

Arabidopsis Description

SRK2CSRK2C [Source:UniProtKB/TrEMBL;Acc:A0A178W6S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.