Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75391 | Canola | cytosol | 97.79 | 98.06 |
| Bra011481.1-P | Field mustard | cytosol | 97.79 | 97.79 |
| CDY72554 | Canola | cytosol | 77.07 | 96.54 |
| AT4G33950.1 | Thale cress | cytosol | 96.13 | 96.13 |
| Solyc01g108280.2.1 | Tomato | cytosol | 89.5 | 89.5 |
| PGSC0003DMT400066617 | Potato | cytosol, nucleus | 89.5 | 89.5 |
| KRG89230 | Soybean | cytosol | 89.23 | 88.74 |
| KRH71186 | Soybean | endoplasmic reticulum | 86.46 | 88.42 |
| VIT_03s0063g01080.t01 | Wine grape | cytosol | 87.02 | 86.78 |
| KRH49772 | Soybean | cytosol | 88.67 | 86.76 |
| KRH50231 | Soybean | cytosol | 87.29 | 86.1 |
| CDY01456 | Canola | cytosol | 78.18 | 78.18 |
| CDY12785 | Canola | cytosol | 78.18 | 78.18 |
| CDX88435 | Canola | cytosol | 58.84 | 74.74 |
| CDY23007 | Canola | cytosol | 74.31 | 74.52 |
| CDY02082 | Canola | cytosol | 74.03 | 74.24 |
| CDY68287 | Canola | cytosol | 22.38 | 72.97 |
| CDY46190 | Canola | cytosol | 70.17 | 72.16 |
| CDX87456 | Canola | cytosol | 63.26 | 71.79 |
| CDY20973 | Canola | cytosol | 68.23 | 69.77 |
| CDX79254 | Canola | cytosol | 65.75 | 69.59 |
| CDY34668 | Canola | cytosol | 68.51 | 68.7 |
| CDY34860 | Canola | cytosol | 67.68 | 68.63 |
| CDX97923 | Canola | cytosol | 67.68 | 67.68 |
| CDX69364 | Canola | cytosol | 64.64 | 67.44 |
| CDX84430 | Canola | cytosol | 64.92 | 66.76 |
| CDY41527 | Canola | cytosol | 65.19 | 66.11 |
| CDY38921 | Canola | cytosol | 60.77 | 64.52 |
| CDX69936 | Canola | cytosol | 65.19 | 64.31 |
| CDX89537 | Canola | cytosol | 59.39 | 63.99 |
| CDX78346 | Canola | cytosol | 64.64 | 63.24 |
| CDX81116 | Canola | cytosol | 64.36 | 62.97 |
| CDY21553 | Canola | cytosol | 65.19 | 62.6 |
| CDY20594 | Canola | cytosol | 51.93 | 61.24 |
| CDY19332 | Canola | cytosol | 68.23 | 59.52 |
| CDY31613 | Canola | cytosol | 22.65 | 58.99 |
| CDY68254 | Canola | cytosol | 32.32 | 58.21 |
| CDX97922 | Canola | cytosol | 39.23 | 57.96 |
| CDY52825 | Canola | plasma membrane | 25.14 | 54.49 |
| CDY03768 | Canola | cytosol | 69.89 | 42.95 |
| CDX68023 | Canola | cytosol | 65.47 | 37.86 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.2 | MapMan:26.2.1.3 | Gene3D:3.30.200.20 | GO:A0A078BW48 | EnsemblPlants:CDX69016 |
| ProteinID:CDX69016 | ProteinID:CDX69016.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00130771001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24343 | PANTHER:PTHR24343:SF162 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EDD552 | SEG:seg | : | : | : |
Description
BnaC01g04370D
Coordinates
chrLK031789:+:2463185..2465320
Molecular Weight (calculated)
41027.8 Da
IEP (calculated)
4.704
GRAVY (calculated)
-0.349
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRPAVSGPM DLPTMHDSDR YELVKDIGSG NFGVARLMRD KLSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVVLTPTHL AIVMEYAAGG
101: ELFERICSAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADIMNDDT MNSQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQSLNHYRT GSMDIDEEME EDLESDLDDL DIDSSGEIVY AM
101: ELFERICSAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADIMNDDT MNSQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQSLNHYRT GSMDIDEEME EDLESDLDDL DIDSSGEIVY AM
001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM
Arabidopsis Description
SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.