Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50003 | Canola | nucleus | 90.06 | 37.56 |
| CDY18067 | Canola | cytosol | 12.87 | 37.29 |
| CDY14318 | Canola | nucleus | 90.06 | 36.49 |
| Bra010441.1-P | Field mustard | cytosol | 87.72 | 35.55 |
| CDX94382 | Canola | cytosol | 84.8 | 34.52 |
| CDX92752 | Canola | cytosol | 82.46 | 34.39 |
| CDY42756 | Canola | cytosol | 83.04 | 34.38 |
| CDX89368 | Canola | cytosol | 85.38 | 34.27 |
| AT4G26080.1 | Thale cress | cytosol, nucleus, plastid | 84.21 | 33.18 |
| CDY38260 | Canola | cytosol | 75.44 | 30.57 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 74.85 | 30.26 |
| CDX83901 | Canola | cytosol | 60.23 | 29.43 |
| CDX96761 | Canola | cytosol | 59.65 | 29.14 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 60.82 | 21.89 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 60.82 | 21.49 |
| CDY26234 | Canola | cytosol | 61.4 | 21.17 |
| KRH37441 | Soybean | cytosol | 63.16 | 20.69 |
| CDY67227 | Canola | cytosol | 44.44 | 20.49 |
| CDY48313 | Canola | cytosol | 59.65 | 20.36 |
| CDY67257 | Canola | nucleus | 43.86 | 20.22 |
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 62.57 | 19.96 |
| KRH12454 | Soybean | cytosol | 61.4 | 19.92 |
| KRH02667 | Soybean | cytosol, nucleus, peroxisome | 61.99 | 19.7 |
| CDY45436 | Canola | cytosol | 42.11 | 19.67 |
| CDY40181 | Canola | cytosol | 42.11 | 19.67 |
| Solyc07g040990.2.1 | Tomato | cytosol | 60.82 | 19.4 |
| PGSC0003DMT400046382 | Potato | cytosol | 60.82 | 19.12 |
| CDY08530 | Canola | nucleus | 43.27 | 18.83 |
| CDY01017 | Canola | nucleus | 43.27 | 18.83 |
| CDY06705 | Canola | nucleus | 41.52 | 18.21 |
| CDY38877 | Canola | cytosol | 41.52 | 17.49 |
| CDY10275 | Canola | nucleus | 43.27 | 17.21 |
| CDX80307 | Canola | nucleus, plastid | 39.18 | 16.92 |
| CDY33008 | Canola | nucleus, plastid | 38.6 | 16.71 |
| CDY32620 | Canola | cytosol | 36.84 | 16.11 |
| CDY06259 | Canola | nucleus | 40.94 | 16.05 |
| CDY36606 | Canola | nucleus | 18.13 | 12.4 |
| CDY53715 | Canola | plasma membrane, vacuole | 31.58 | 5.22 |
| CDX93912 | Canola | plasma membrane, vacuole | 31.58 | 5.21 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | GO:A0A078IJB1 | UniProt:A0A078IJB1 |
| EnsemblPlants:CDY50002 | ProteinID:CDY50002 | ProteinID:CDY50002.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00094207001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0004EF2ECF | : | : | : | : |
Description
BnaC08g12090DBnaC08g12090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJB1]
Coordinates
chrLK032874:+:14981..16613
Molecular Weight (calculated)
18810.7 Da
IEP (calculated)
6.950
GRAVY (calculated)
-0.391
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAHANPDEL HLLGQAQPDR EDEAATIEAA GGKVIRWNGG RVFGVLAMSR SIGDRYLKPS IIPDPEVTAV KRVKEDDCLI LASDGVWDVM TDEEACEMAR
101: KRILLWHKKN MVAGDASLLT DERRGEGEDP AAKSAAEYLS KLALQRGSKD NITVVVVDLK PHRKLKIKAL S
101: KRILLWHKKN MVAGDASLLT DERRGEGEDP AAKSAAEYLS KLALQRGSKD NITVVVVDLK PHRKLKIKAL S
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.