Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036488.1-P | Field mustard | cytosol, extracellular, plasma membrane | 93.22 | 95.8 |
| CDY05774 | Canola | cytosol | 97.08 | 92.75 |
| AT2G20580.1 | Thale cress | cytosol | 92.41 | 88.78 |
| CDY29907 | Canola | extracellular | 88.67 | 85.19 |
| CDX92875 | Canola | extracellular | 88.32 | 84.85 |
| CDY38389 | Canola | cytosol, extracellular | 87.73 | 84.19 |
| CDY35187 | Canola | cytosol, extracellular | 87.62 | 84.08 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 81.66 | 78.54 |
| Solyc07g053650.2.1 | Tomato | nucleus | 73.83 | 76.89 |
| CDY14239 | Canola | cytosol, extracellular | 78.62 | 75.79 |
| PGSC0003DMT400024306 | Potato | cytosol | 79.32 | 75.78 |
| CDY72396 | Canola | cytosol | 12.73 | 75.69 |
| CDX97442 | Canola | cytosol | 77.22 | 74.86 |
| GSMUA_Achr11P... | Banana | cytosol | 71.85 | 69.26 |
| TraesCS6A01G116500.1 | Wheat | golgi, unclear | 71.85 | 68.72 |
| TraesCS6D01G105500.1 | Wheat | golgi | 71.85 | 68.72 |
| Os02t0146700-02 | Rice | plasma membrane | 71.73 | 68.37 |
| HORVU6Hr1G021020.1 | Barley | cytosol | 71.61 | 68.26 |
| Zm00001d053881_P001 | Maize | mitochondrion, plastid | 70.79 | 67.94 |
| TraesCS6B01G144500.1 | Wheat | cytosol | 71.73 | 67.92 |
| EES04513 | Sorghum | cytosol | 70.79 | 67.79 |
| Zm00001d015259_P001 | Maize | cytosol | 70.33 | 67.64 |
| Os09t0326800-01 | Rice | plasma membrane | 69.28 | 66.55 |
| Os06t0699900-01 | Rice | plasma membrane | 69.86 | 66.37 |
| Solyc10g008180.1.1 | Tomato | plastid | 54.91 | 64.3 |
| KRH57774 | Soybean | endoplasmic reticulum, plasma membrane | 20.56 | 60.27 |
| TraesCS7B01G322000.1 | Wheat | cytosol | 57.71 | 56.14 |
| TraesCS7B01G321900.1 | Wheat | cytosol | 56.07 | 55.36 |
| TraesCS7D01G413900.1 | Wheat | mitochondrion | 53.74 | 55.35 |
| TraesCS7A01G421600.1 | Wheat | mitochondrion | 52.8 | 55.32 |
| TraesCS7A01G421700.1 | Wheat | cytosol | 56.66 | 55.11 |
| TraesCS7D01G413800.1 | Wheat | cytosol | 39.49 | 54.52 |
| CDX99107 | Canola | cytosol | 14.6 | 48.26 |
| HORVU7Hr1G097500.16 | Barley | endoplasmic reticulum, golgi, plasma membrane | 30.72 | 44.88 |
| CDY33144 | Canola | extracellular | 14.84 | 40.58 |
| CDY65736 | Canola | extracellular | 15.77 | 33.25 |
| CDY33145 | Canola | extracellular | 0.58 | 21.74 |
| GSMUA_Achr1P10580_001 | Banana | cytosol, nucleus, plasma membrane | 3.04 | 17.93 |
| CDY12178 | Canola | cytosol | 16.36 | 14.11 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 15.89 | 14.04 |
| CDY19162 | Canola | extracellular | 16.12 | 13.74 |
| CDX84724 | Canola | cytosol, plastid | 16.12 | 13.73 |
| CDX79472 | Canola | cytosol, plastid | 16.0 | 13.71 |
| CDY23791 | Canola | cytosol, plastid | 16.12 | 13.69 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.1 | InterPro:26S_Psome_Rpn1 | UniProt:A0A078H372 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY31952 | ProteinID:CDY31952 | ProteinID:CDY31952.1 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 |
| GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 |
| EnsemblPlantsGene:GSBRNA2T00050742001 | InterPro:IPR011989 | PIRSF:PIRSF015965 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF8 | SUPFAM:SSF48371 |
| SignalP:SignalP-noTM | UniParc:UPI0004EF03BC | SEG:seg | : | : | : |
Description
BnaA07g00430DBnaA07g00430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H372]
Coordinates
chrLK032283:-:136275..142349
Molecular Weight (calculated)
94220.8 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.066
Length
856 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLLLLASHF TPTYLAPTPD TNSVGGGGAR KDEASVKVPS KDPKKKDDKK KDDLSEEDLE LKQNLELYVE RLQDPNPDLQ RAALESMRQE IRASTSSMTS
101: VPKPLKFLRP HYGTLKAFHQ TMPASDLKKC LSDILSVLAL TMSAEGQRES LSYRLIGTKG DIGSWGHEYV RNLAGEIVQE YTKRQSEEAP IDDLMELVQQ
201: IVAFHMKHNA ETEAVDLLMD VEDLDLLLEH VDKTNFKRTC NYLTTAAKYL PGPDDMLVLD ISYMIYMKFE EYPNALQIAV FLDNTQYVKQ VFTSCADLLR
301: KKQFCYMIAR HGITFELDDE MVADEDDREA LQDIVNNTKL SEGYLTLARD IEVMEAKTPE DIYKAHLLDG RASSGASVDS ARQNLAATFV NAFVNAGFGQ
401: DKLMTVPSDS TTGSSGNWLF KNKEHGKISA AASLGMIQLW DVEGGLAQLD KYFHSNDNPI LSGALLGVGI VNCGIKSDCD PALALLGDYL DKEDSSVRIG
501: AIMGLGIAYA APLDVIAFAS LSLGMIYVGS CNEEVAQSII FALMDRSEAE LGDALTRFLP LGLGLLYLGK QESVEATAEV SKTFNEKIKK YCDMTLLSCA
601: YAGTGNVLKV QDLLAQCGEH LEKGDIHQGP AVLGLAMVAM SEELGIDMEI RSLERMLQYG EQNIRRAVPL ALGLLCISNP KVTVMDTLSR PSHDTDSEVA
701: MDASLLFCVR IAQGLVHMGK GLLTLTPFHS ERFLLSPTAL AGIVILLHAC LDMKPIILGK YHYVLYFLVL AMQPRMMLTV DKDLKPLSVP VRVGQAVDVV
801: GQAGRPKTIT GFQTHSTPVL LAAGERAELA TDKYIPLSPI LKGFIILEEN ADYREE
101: VPKPLKFLRP HYGTLKAFHQ TMPASDLKKC LSDILSVLAL TMSAEGQRES LSYRLIGTKG DIGSWGHEYV RNLAGEIVQE YTKRQSEEAP IDDLMELVQQ
201: IVAFHMKHNA ETEAVDLLMD VEDLDLLLEH VDKTNFKRTC NYLTTAAKYL PGPDDMLVLD ISYMIYMKFE EYPNALQIAV FLDNTQYVKQ VFTSCADLLR
301: KKQFCYMIAR HGITFELDDE MVADEDDREA LQDIVNNTKL SEGYLTLARD IEVMEAKTPE DIYKAHLLDG RASSGASVDS ARQNLAATFV NAFVNAGFGQ
401: DKLMTVPSDS TTGSSGNWLF KNKEHGKISA AASLGMIQLW DVEGGLAQLD KYFHSNDNPI LSGALLGVGI VNCGIKSDCD PALALLGDYL DKEDSSVRIG
501: AIMGLGIAYA APLDVIAFAS LSLGMIYVGS CNEEVAQSII FALMDRSEAE LGDALTRFLP LGLGLLYLGK QESVEATAEV SKTFNEKIKK YCDMTLLSCA
601: YAGTGNVLKV QDLLAQCGEH LEKGDIHQGP AVLGLAMVAM SEELGIDMEI RSLERMLQYG EQNIRRAVPL ALGLLCISNP KVTVMDTLSR PSHDTDSEVA
701: MDASLLFCVR IAQGLVHMGK GLLTLTPFHS ERFLLSPTAL AGIVILLHAC LDMKPIILGK YHYVLYFLVL AMQPRMMLTV DKDLKPLSVP VRVGQAVDVV
801: GQAGRPKTIT GFQTHSTPVL LAAGERAELA TDKYIPLSPI LKGFIILEEN ADYREE
1: MVQDPNPDLQ KAALESMRQE IRALTSSMTS VPKPLKFLRP QYVTLKAFHE TMADSNLKKY ISDILSVLAL TTLYRLHYFL ITRR
Arabidopsis Description
26S proteasome non-ATPase regulatory subunit-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SYE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.