Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82211 | Canola | plastid | 100.0 | 100.0 |
| CDY27534 | Canola | mitochondrion, plastid | 88.57 | 88.57 |
| CDY46549 | Canola | mitochondrion | 88.57 | 88.57 |
| CDY37308 | Canola | mitochondrion, plastid | 91.43 | 87.67 |
| CDY43919 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 87.14 | 87.14 |
| AT1G51650.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 87.14 | 87.14 |
| CDX87828 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 85.71 | 85.71 |
| PGSC0003DMT400074206 | Potato | mitochondrion, plastid | 81.43 | 81.43 |
| CDY02587 | Canola | endoplasmic reticulum, extracellular | 82.86 | 79.45 |
| Solyc12g055760.1.1 | Tomato | plastid | 78.57 | 78.57 |
| Solyc06g063220.2.1 | Tomato | plastid | 78.57 | 78.57 |
| TraesCS3A01G291800.1 | Wheat | mitochondrion | 70.0 | 77.78 |
| TraesCS3B01G326400.1 | Wheat | plastid | 68.57 | 76.19 |
| PGSC0003DMT400023749 | Potato | mitochondrion, plastid | 75.71 | 75.71 |
| EES01052 | Sorghum | mitochondrion | 74.29 | 75.36 |
| PGSC0003DMT400068159 | Potato | mitochondrion | 74.29 | 74.29 |
| VIT_10s0092g00280.t01 | Wine grape | mitochondrion | 57.14 | 74.07 |
| Zm00001d044441_P002 | Maize | mitochondrion | 72.86 | 72.86 |
| TraesCS3D01G291500.1 | Wheat | mitochondrion | 71.43 | 72.46 |
| GSMUA_Achr2P05010_001 | Banana | cytosol | 57.14 | 71.43 |
| Zm00001d011314_P001 | Maize | mitochondrion | 72.86 | 69.86 |
| Os08t0250200-01 | Rice | mitochondrion | 68.57 | 69.57 |
| VIT_09s0018g01930.t01 | Wine grape | mitochondrion, plastid | 71.43 | 69.44 |
| GSMUA_Achr9P19600_001 | Banana | mitochondrion | 65.71 | 64.79 |
| VIT_19s0014g04520.t01 | Wine grape | cytosol | 42.86 | 61.22 |
| TraesCS5A01G017000.1 | Wheat | mitochondrion | 58.57 | 59.42 |
| TraesCS5B01G015000.1 | Wheat | mitochondrion | 57.14 | 57.97 |
| HORVU1Hr1G030420.1 | Barley | mitochondrion | 50.0 | 55.56 |
| HORVU5Hr1G004830.5 | Barley | mitochondrion | 55.71 | 45.35 |
| VIT_18s0089g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 48.57 | 45.33 |
| GSMUA_Achr1P15900_001 | Banana | plastid | 65.71 | 35.66 |
| CDX98292 | Canola | cytosol | 75.71 | 32.12 |
Protein Annotations
| Gene3D:1.10.1620.20 | MapMan:2.4.6.2.6 | GO:A0A078H6H6 | UniProt:A0A078H6H6 | InterPro:ATP_synth_F1_esu_mt | InterPro:ATP_synth_F1_esu_sf_mt |
| EnsemblPlants:CDY32413 | ProteinID:CDY32413 | ProteinID:CDY32413.1 | GO:GO:0000275 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046933 | GO:GO:0099132 | EnsemblPlantsGene:GSBRNA2T00052006001 |
| InterPro:IPR036742 | PFAM:PF04627 | PANTHER:PTHR12448 | PANTHER:PTHR12448:SF0 | SUPFAM:SSF48690 | UniParc:UPI0004EDBC00 |
Description
BnaC03g41970DBnaA03g36100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6H6]
Coordinates
chrLK032294:+:220693..221631
Molecular Weight (calculated)
7832.5 Da
IEP (calculated)
10.120
GRAVY (calculated)
-0.286
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MASTAAVPFW RAAGMTYITY SNICANLVRN CLKEPFKAES MSREKVHFSL SKWADGKPQK PVLRSDAPQV
1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV
Arabidopsis Description
ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,cytosol,golgi,plasma membrane,vacuole,endoplasmic reticulum,mitochondrion,plastid]
SUBAcon: [extracellular,cytosol,golgi,plasma membrane,vacuole,endoplasmic reticulum,mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.