Factsheet for VIT_10s0092g00280.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g04520.t01	Wine grape	cytosol	57.41	63.27
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	83.33	62.5
Bra014294.1-P	Field mustard	mitochondrion	79.63	61.43
CDY46549	Canola	mitochondrion	79.63	61.43
EES01052	Sorghum	mitochondrion	77.78	60.87
Zm00001d044441_P002	Maize	mitochondrion	77.78	60.0
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.78	60.0
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.78	60.0
Bra030431.1-P	Field mustard	cytosol	61.11	58.93
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.93	58.57
KRH44639	Soybean	mitochondrion	70.37	57.58
Zm00001d011314_P001	Maize	mitochondrion	77.78	57.53
CDY32413	Canola	plastid	74.07	57.14
CDX82211	Canola	plastid	74.07	57.14
TraesCS3B01G326400.1	Wheat	plastid	66.67	57.14
TraesCS3A01G291800.1	Wheat	mitochondrion	66.67	57.14
PGSC0003DMT400023749	Potato	mitochondrion, plastid	72.22	55.71
Solyc06g063220.2.1	Tomato	plastid	72.22	55.71
Os08t0250200-01	Rice	mitochondrion	70.37	55.07
CDY27534	Canola	mitochondrion, plastid	70.37	54.29
PGSC0003DMT400074206	Potato	mitochondrion, plastid	70.37	54.29
Bra023896.1-P	Field mustard	mitochondrion	72.22	54.17
CDY37308	Canola	mitochondrion, plastid	72.22	53.42
PGSC0003DMT400068159	Potato	mitochondrion	68.52	52.86
Solyc12g055760.1.1	Tomato	plastid	68.52	52.86
TraesCS3D01G291500.1	Wheat	mitochondrion	66.67	52.17
KRH47013	Soybean	mitochondrion	66.67	51.43
GSMUA_Achr9P19600_001	Banana	mitochondrion	66.67	50.7
CDY02587	Canola	endoplasmic reticulum, extracellular	68.52	50.68
HORVU1Hr1G030420.1	Barley	mitochondrion	57.41	49.21
GSMUA_Achr2P05010_001	Banana	cytosol	50.0	48.21
TraesCS5A01G017000.1	Wheat	mitochondrion	61.11	47.83
TraesCS5B01G015000.1	Wheat	mitochondrion	59.26	46.38
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	62.96	45.33
HORVU5Hr1G004830.5	Barley	mitochondrion	61.11	38.37
GSMUA_Achr1P15900_001	Banana	plastid	66.67	27.91
CDX98292	Canola	cytosol	68.52	22.42

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	ProteinID:CCB61492	ProteinID:CCB61492.1
UniProt:F6I3H4	EMBL:FN596741	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0046933	GO:GO:0099132
InterPro:IPR036742	PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI00021088E0
ArrayExpress:VIT_10s0092g00280	EnsemblPlantsGene:VIT_10s0092g00280	EnsemblPlants:VIT_10s0092g00280.t01	:	:	:

Description

No Description!

Coordinates

chr10:-:11713090..11715870

Molecular Weight (calculated)

6289.7 Da

IEP (calculated)

9.854

GRAVY (calculated)

0.069

Length

54 amino acids

Sequence
(BLAST)

1: MVPFWRAIVP FWRAAGMTYI SYSNICANLV RNCLKEPFKS EALTHEKVHF SISK

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.